RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OR52N5Q8NH56 324 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 MITD1Q8WV92 249 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 PPP1R1CQ8WVI7 109 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 MARC2Q969Z3 335 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 FAHD2AQ96GK7 314 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 SEC22AQ96IW7 307 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 ZNF75AQ96N20 296 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 CDCA3Q99618 268 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 GAL3ST1Q99999 423 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 MTIF3Q9H2K0 278 aaKnown RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 GAREM1Q9H706 876 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 GDF2Q9UK05 429 aaPredicted RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
CDH13-204ENST00000539548 TDRD6O60522 2096 aaKnown RBP8.67□□□□□ -1.02
CDH13-204ENST00000539548 C9orf170A2RU37 121 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CPED1A4D0V7 1026 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 RAB19A4D1S5 217 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 TMEM235A6NFC5 223 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 SULT2B1O00204 365 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 SLC25A12O75746 678 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 SEMA4FO95754 770 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 IGKV3-11P04433 115 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CRABP1P29762 137 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 DLSTP36957 453 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 ATP1B3P54709 279 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 DCAF7P61962 342 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 SPOCK1Q08629 439 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 SNTB1Q13884 538 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 HYAL4Q2M3T9 481 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 ZNF260Q3ZCT1 412 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 RNASE10Q5GAN6 216 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 POMZP3Q6PJE2 187 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 ZNF704Q6ZNC4 412 aaPredicted RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 MARCH3Q86UD3 253 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PRR22Q8IZ63 422 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 JAGN1Q8N5M9 183 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 NKAIN3Q8N8D7 197 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 OR8D2Q9GZM6 311 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 ZMAT3Q9HA38 289 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 G6PC2Q9NQR9 355 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PURGQ9UJV8 347 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 RHBDD3Q9Y3P4 386 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 COL6A3P12111 3177 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PCNX3Q9H6A9 2034 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 TMED7-TICAM2A0A0A6YYA0 188 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 FITM1A5D6W6 292 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 WIPF3A6NGB9 483 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 ALG1L2C9J202 215 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PLPP3O14495 311 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 EIF1AYO14602 144 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 CCSO14618 274 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 GMFGO60234 142 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PLATP00750 562 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 IGHV4-34P06331 123 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CASRP41180 1078 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 EIF1AXP47813 144 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 FLI1Q01543 452 aaPredicted RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 GLO1Q04760 184 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PPP1R1AQ13522 171 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 INPP5JQ15735 1006 aaPredicted RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 NKPD1Q17RQ9 610 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CDNFQ49AH0 187 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 TMEM244Q5VVB8 128 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 FAM109BQ6ICB4 259 aaPredicted RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 OR10K2Q6IF99 312 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 C3orf33Q6P1S2 294 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CD163Q86VB7 1156 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 FJX1Q86VR8 437 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 OR4S1Q8NGB4 309 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 THAP6Q8TBB0 222 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 ZNF721Q8TF20 911 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 MRGPRFQ96AM1 343 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 DNAJA3Q96EY1 480 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 PHB2Q99623 299 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CST11Q9H112 138 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 OR52A1Q9UKL2 312 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 COA3Q9Y2R0 106 aaPredicted RBP8.66□□□□□ -1.02
CDH13-204ENST00000539548 KCNK7Q9Y2U2 307 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 TMED7Q9Y3B3 224 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 EMC9Q9Y3B6 208 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 MMACHCQ9Y4U1 282 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 CHD9Q3L8U1 2897 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 F5P12259 2224 aa8.66□□□□□ -1.02
CDH13-204ENST00000539548 THADAQ6YHU6 1953 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 LOC107986453A0A1B0GWG9 222 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 A8MVM7 634 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 B4DGG1 531 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 RAB27BO00194 218 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 SIGLEC5O15389 551 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 LINC01565O15544 149 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 FGF16O43320 207 aa8.65□□□□□ -1.02
CDH13-204ENST00000539548 SIGLEC6O43699 453 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms