RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZMYND11Q15326 602 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 TUSC1Q2TAM9 212 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 TSEN54Q7Z6J9 526 aaKnown RBP10.54□□□□□ -0.72
VAMP1-206ENST00000538970 TREML1Q86YW5 311 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 RP9Q8TA86 221 aaKnown RBP10.54□□□□□ -0.72
VAMP1-206ENST00000538970 SLC7A6Q92536 515 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 POP5Q969H6 163 aaKnown RBP10.54□□□□□ -0.72
VAMP1-206ENST00000538970 RASD2Q96D21 266 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 ANKRD19PQ9H560 264 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 NTN4Q9HB63 628 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 PATZ1Q9HBE1 687 aaKnown RBP10.54□□□□□ -0.72
VAMP1-206ENST00000538970 MMP26Q9NRE1 261 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 PLEK2Q9NYT0 353 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 ASH2LQ9UBL3 628 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 IL19Q9UHD0 177 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 TMEM5Q9Y2B1 443 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 POLR3KQ9Y2Y1 108 aaPredicted RBP10.54□□□□□ -0.72
VAMP1-206ENST00000538970 STARD10Q9Y365 291 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 PKD1L1Q8TDX9 2849 aa10.54□□□□□ -0.72
VAMP1-206ENST00000538970 OR6C6A6NF89 314 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 A8MXK9 166 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 F5H0A9 414 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 TRAPPC2LH3BP13 241 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SERPINA1P01009 418 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 ZNF12P17014 697 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 FPR2P25090 351 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SDHAP31040 664 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SLC6A9P48067 706 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 GSK3BP49841 420 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 MMP16P51512 607 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 ZNF154Q13106 437 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 AWAT1Q58HT5 328 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 ARMCX4Q5H9R4 360 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 OTPQ5XKR4 325 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 C8orf82Q6P1X6 216 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 FKBP9P1Q75LS8 142 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 LRRC28Q86X40 367 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 KLHL36Q8N4N3 616 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SGMS2Q8NHU3 365 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SLC7A13Q8TCU3 470 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 ITLN1Q8WWA0 313 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 HAVCR1Q96D42 359 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 CMBLQ96DG6 245 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 FAM46AQ96IP4 442 aaKnown RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 COG8Q96MW5 612 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 GPX7Q96SL4 187 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 NDEL1Q9GZM8 345 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 NMNAT1Q9HAN9 279 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 NRIP3Q9NQ35 241 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 VSX1Q9NZR4 365 aaPredicted RBP10.53□□□□□ -0.72
VAMP1-206ENST00000538970 EGFL7Q9UHF1 273 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 ATPIF1Q9UII2 106 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 PPP1R3CQ9UQK1 317 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 SIGLEC7Q9Y286 467 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 PPIAL4AQ9Y536 164 aa10.53□□□□□ -0.72
VAMP1-206ENST00000538970 J3QW42 95 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 IMPA2O14732 288 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 GSTA4O15217 222 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 SURF4O15260 269 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 SLC16A7O60669 478 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 KHDRBS3O75525 346 aaKnown RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 NDUFB2O95178 105 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 COX4I1P13073 169 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 FXYD6P3P58550 94 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 LSM6P62312 80 aaKnown RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 GUCY1A3Q02108 690 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 KLF17Q5JT82 389 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 C1orf94Q6P1W5 598 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 DOK3Q7L591 496 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 RRM2BQ7LG56 351 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 ADCK1Q86TW2 530 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 CYP4Z1Q86W10 505 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 SIGLECL1Q8N7X8 197 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 OR1F12Q8NHA8 337 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 PTP4A1Q93096 173 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 OR2V2Q96R30 315 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 HOPXQ9BPY8 73 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 DDX28Q9NUL7 540 aaKnown RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 ZNF69Q9UC07 566 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 NUP50Q9UKX7 468 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 COA3Q9Y2R0 106 aaPredicted RBP10.52□□□□□ -0.73
VAMP1-206ENST00000538970 INSIG2Q9Y5U4 225 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 AUP1Q9Y679 476 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 ENPP4Q9Y6X5 453 aa10.52□□□□□ -0.73
VAMP1-206ENST00000538970 A0A1W2PRQ8 180 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 TMEM178BH3BS89 294 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 RER1O15258 196 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 PTP4A3O75365 173 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 H1F0P07305 194 aaKnown RBP10.51□□□□□ -0.73
VAMP1-206ENST00000538970 DBHP09172 617 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 RAC2P15153 192 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
VAMP1-206ENST00000538970 OMPP47874 163 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 RGS6P49758 472 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 DEFA6Q01524 100 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 DGCR6Q14129 220 aa10.51□□□□□ -0.73
VAMP1-206ENST00000538970 KCNMB1Q16558 191 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms