RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SEC22AQ96IW7 307 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 C1QTNF6Q9BXI9 259 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF436Q9C0F3 470 aaPredicted RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 RANBP3Q9H6Z4 567 aaPredicted RBP7.78□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF160Q9HCG1 818 aa7.78□□□□□ -1.16
UBE3B-208ENST00000538070 CIB4A0PJX0 185 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 RGS13O14921 159 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 RAB3DO95716 219 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 TXNDC12O95881 172 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 CALCBP10092 127 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 VAMP1P23763 118 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 GALNSP34059 522 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 FAUP35544 74 aaKnown RBP7.77□□□□□ -1.16
UBE3B-208ENST00000538070 DAP3P51398 398 aaKnown RBP7.77□□□□□ -1.16
UBE3B-208ENST00000538070 STARD6P59095 220 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 CHAF1BQ13112 559 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 THOC7Q6I9Y2 204 aaKnown RBP7.77□□□□□ -1.16
UBE3B-208ENST00000538070 WDR74Q6RFH5 385 aaPredicted RBP7.77□□□□□ -1.16
UBE3B-208ENST00000538070 PLPP5Q8NEB5 264 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 OR52N4Q8NGI2 321 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 ZNF519Q8TB69 540 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 RASL10BQ96S79 203 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 SLC6A7Q99884 636 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 PDCD10Q9BUL8 212 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 ZFP64Q9NPA5 681 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 DLL4Q9NR61 685 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 COPZ2Q9P299 210 aa7.77□□□□□ -1.16
UBE3B-208ENST00000538070 ANKUB1A6NFN9 424 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 I3L521 148 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 PHYHO14832 338 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 LAMTOR5O43504 91 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 SCO1O75880 301 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 MPIG6BO95866 241 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 IGHV3-9P01782 118 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 QDPRP09417 244 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 ZNF35P13682 527 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 GNG2P59768 71 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 ZP1P60852 638 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 GRK1Q15835 563 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 ISXQ2M1V0 245 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 AWAT2Q6E213 333 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 PLXDC2Q6UX71 529 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 BAIAP2L2Q6UXY1 529 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 KCTD9Q7L273 389 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 GALNTL5Q7Z4T8 443 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 NAA40Q86UY6 237 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 BPHLQ86WA6 291 aaPredicted RBP7.77□□□□□ -1.17
UBE3B-208ENST00000538070 OR4D6Q8NGJ1 314 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 OR10K1Q8NGX5 313 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 ASB17Q8WXJ9 295 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 MAFIPQ8WZ33 124 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 GON7Q9BXV9 100 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 SELENOIQ9C0D9 397 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 GPN1Q9HCN4 374 aaPredicted RBP7.77□□□□□ -1.17
UBE3B-208ENST00000538070 TMEM131Q92545 1883 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 LOC100289279A0A1B0GTE1 492 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 L7N2F9 121 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 M0R233 179 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 ZNF432O94892 652 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 CYB5AP00167 134 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 GAAP10253 952 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 C9orf135Q5VTT2 229 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 CD276Q5ZPR3 534 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 IDO2Q6ZQW0 420 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 RABEPKQ7Z6M1 372 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 YRDCQ86U90 279 aaKnown RBP7.77□□□□□ -1.17
UBE3B-208ENST00000538070 BIVMQ86UB2 503 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 COQ8AQ8NI60 647 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 SLC22A8Q8TCC7 542 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 HAVCR2Q8TDQ0 301 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 ASB10Q8WXI3 467 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
UBE3B-208ENST00000538070 SLC5A6Q9Y289 635 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 PLEKHA6Q9Y2H5 1048 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 MYO7BQ6PIF6 2116 aa7.77□□□□□ -1.17
UBE3B-208ENST00000538070 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 TRBV5-5A0A0J9YX44 114 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 TNFRSF10AO00220 468 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 XRCC3O43542 346 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 PATE4P0C8F1 98 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 GNB3P16520 340 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 SPINK2P20155 84 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 APOBEC1P41238 236 aaKnown RBP7.76□□□□□ -1.17
UBE3B-208ENST00000538070 RAB14P61106 215 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 PMPCAQ10713 525 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 DYRK1AQ13627 763 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 C2orf68Q2NKX9 166 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 LGALSLQ3ZCW2 172 aaPredicted RBP7.76□□□□□ -1.17
UBE3B-208ENST00000538070 METTL11BQ5VVY1 283 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 STEAP1BQ6NZ63 245 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 CFAP77Q6ZQR2 320 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 UCN2Q96RP3 112 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 SPSB2Q99619 263 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 DUSP23Q9BVJ7 150 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 RAB33BQ9H082 229 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 DKKL1Q9UK85 242 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 RABL2BQ9UNT1 228 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 WIF1Q9Y5W5 379 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 A0A1W2PP11 408 aa7.76□□□□□ -1.17
UBE3B-208ENST00000538070 A0A1W2PQD3 144 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms