RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CXCR1P25024 350 aa16.15■□□□□ 0.18
RAB40C-203ENST00000535977 ABCD3P28288 659 aa16.15■□□□□ 0.18
RAB40C-203ENST00000535977 IL12BP29460 328 aa16.15■□□□□ 0.18
RAB40C-203ENST00000535977 NANOS3P60323 173 aaKnown RBP16.15■□□□□ 0.18
RAB40C-203ENST00000535977 PLEKHN1Q494U1 663 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-203ENST00000535977 LAMP5Q9UJQ1 280 aa16.15■□□□□ 0.18
RAB40C-203ENST00000535977 TRBV5-5A0A0J9YX44 114 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 TMEM72A0PK05 275 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 BCL2L11O43521 198 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 DDAH2O95865 285 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 MT-ATP6P00846 226 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 MNDAP41218 407 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 HSD11B2P80365 405 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 LTBQ06643 244 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 CBFBQ13951 182 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 LIPNQ5VXI9 398 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 TTLL10Q6ZVT0 673 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 FAM160A2Q8N612 972 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 RNF166Q96A37 237 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 KTI12Q96EK9 354 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 ADOQ96SZ5 270 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 COMMD4Q9H0A8 199 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 CCDC86Q9H6F5 360 aaKnown RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 SRA1Q9HD15 236 aaKnown RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 TREM1Q9NP99 234 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 MRM2Q9UI43 246 aaKnown RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 DMRT1Q9Y5R6 373 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 THADAQ6YHU6 1953 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 TRAV36DV7A0A075B6V5 113 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 PGCP20142 388 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 ARL4DP49703 201 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 EEF1A1P5Q5VTE0 462 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 FCRLAQ7L513 359 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 DMRTC2Q8IXT2 367 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 PHYHIPLQ96FC7 376 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 CNTNAP3BQ96NU0 1288 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 VRK1Q99986 396 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-203ENST00000535977 PLEKHA6Q9Y2H5 1048 aa16.14■□□□□ 0.17
RAB40C-203ENST00000535977 ACOD1A6NK06 481 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 TMEM212A6NML5 194 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 H3BMH7 237 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 ABHD16AO95870 558 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 F13BP05160 661 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 IGFBP4P22692 258 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 DEFA6Q01524 100 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 RASGEF1BQ0VAM2 473 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 STX12Q86Y82 276 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 ZNF433Q8N7K0 673 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-203ENST00000535977 ZNF321PQ8N8H1 164 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 ZNF565Q8N9K5 539 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 GFI1Q99684 422 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 TPSD1Q9BZJ3 242 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 LMAN1LQ9HAT1 526 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 METTL1Q9UBP6 276 aaKnown RBP16.13■□□□□ 0.17
RAB40C-203ENST00000535977 FAM171A2A8MVW0 826 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 ALG1L2C9J202 215 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 OR8G3PP0DMU2 310 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 RPS15P62841 145 aaKnown RBP16.13■□□□□ 0.17
RAB40C-203ENST00000535977 TMEM69Q5SWH9 247 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 STPG1Q5TH74 334 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 STAC2Q6ZMT1 411 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 MAMDC2Q7Z304 686 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-203ENST00000535977 C1orf216Q8TAB5 229 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 ZNF417Q8TAU3 575 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 TAAR8Q969N4 342 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 TSPAN32Q96QS1 320 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 SEC11CQ9BY50 192 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 UFSP2Q9NUQ7 469 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 FOXJ3Q9UPW0 622 aa16.13■□□□□ 0.17
RAB40C-203ENST00000535977 IDSB3KWA1 339 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 ALOX5APP20292 161 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 AGTR1P30556 359 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 CLDN12P56749 244 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 RBM39Q14498 530 aaKnown RBP16.12■□□□□ 0.17
RAB40C-203ENST00000535977 MESTQ5EB52 335 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 YOD1Q5VVQ6 348 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-203ENST00000535977 RGP1Q92546 391 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-203ENST00000535977 INTS14Q96SY0 518 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 FRRS1LQ9P0K9 344 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 ZNF346Q9UL40 294 aaKnown RBP16.12■□□□□ 0.17
RAB40C-203ENST00000535977 MTCH2Q9Y6C9 303 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 SPTBP11277 2137 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 HCRTR2O43614 444 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 BGLAPP02818 100 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 GRPRP30550 384 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 ZNF117Q03924 483 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 PLXDC1Q8IUK5 500 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 PAQR8Q8TEZ7 354 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 DUSP19Q8WTR2 217 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 ASB17Q8WXJ9 295 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 HAVCR1Q96D42 359 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 TSSK2Q96PF2 358 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 CHST6Q9GZX3 395 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 ANKRD10Q9NXR5 420 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 COPS7AQ9UBW8 275 aa16.12■□□□□ 0.17
RAB40C-203ENST00000535977 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
RAB40C-203ENST00000535977 PRR32B1ATL7 298 aa16.11■□□□□ 0.17
RAB40C-203ENST00000535977 XKRYO14609 159 aa16.11■□□□□ 0.17
RAB40C-203ENST00000535977 FADS1O60427 444 aa16.11■□□□□ 0.17
RAB40C-203ENST00000535977 TSPAN2O60636 221 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms