RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 KCTD14Q9BQ13 255 aaPredicted RBP2.21□□□□□ -2.06
VBP1-203ENST00000535916 BBS2Q9BXC9 721 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 MAP1LC3CQ9BXW4 147 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 RNF167Q9H6Y7 350 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 BEX1Q9HBH7 125 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 ZC4H2Q9NQZ6 224 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 STMN3Q9NZ72 180 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 DDX19BQ9UMR2 479 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 UBQLN1Q9UMX0 589 aaKnown RBP2.21□□□□□ -2.06
VBP1-203ENST00000535916 POFUT2Q9Y2G5 429 aa2.21□□□□□ -2.06
VBP1-203ENST00000535916 YARS2Q9Y2Z4 477 aaKnown RBP2.21□□□□□ -2.06
VBP1-203ENST00000535916 GLYATL1P3A0A0U1RQE8 302 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TSPAN11A1L157 253 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TMEM150BA6NC51 233 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 RFXANKO14593 260 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 MGRN1O60291 552 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ENTPD5O75356 428 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 MED6O75586 246 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 CBR3O75828 277 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ZMPSTE24O75844 475 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 BRI3O95415 125 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 KRT16P08779 473 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 HPGDP15428 266 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TCN1P20061 433 aaPredicted RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 SLC2A5P22732 501 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 IL32P24001 234 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 CXCR2P25025 360 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 OR1E1P30953 314 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 SHMT2P34897 504 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 HTR2BP41595 481 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ATP6V0D1P61421 351 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 STXBP1P61764 594 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 ZNF33AQ06730 810 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 PDIA2Q13087 525 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 MADCAM1Q13477 382 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TSC22D1Q15714 1073 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TRMT5Q32P41 509 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 TPRG1LQ5T0D9 272 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TIGD3Q6B0B8 471 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 C6orf89Q6UWU4 347 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 UNQ9370/PRO34162Q6UXP9 181 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ZNF621Q6ZSS3 439 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 SLC26A11Q86WA9 606 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 SKA3Q8IX90 412 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TRAM1L1Q8N609 369 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 EID2Q8N6I1 236 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ZNF740Q8NDX6 193 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 OR10G3Q8NGC4 313 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 OR5B3Q8NH48 314 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ITFG1Q8TB96 612 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ZNF502Q8TBZ5 544 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 PDCD6IPQ8WUM4 868 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 ACOT11Q8WXI4 607 aaPredicted RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 BAALCQ8WXS3 180 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 MRGPRFQ96AM1 343 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 APH1AQ96BI3 265 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 CPB2Q96IY4 423 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 GLT1D1Q96MS3 346 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 FOPNLQ96NB1 174 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 TRNT1Q96Q11 434 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 HIST1H4GQ99525 98 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 RARRES2Q99969 163 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 RIOK2Q9BVS4 552 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 NAA50Q9GZZ1 169 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 CHRNA10Q9GZZ6 450 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 MRPL47Q9HD33 250 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 AGPAT4Q9NRZ5 378 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 SAMSN1Q9NSI8 373 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 CLN6Q9NWW5 311 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 CHMP5Q9NZZ3 219 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 STX18Q9P2W9 335 aaKnown RBP2.2□□□□□ -2.06
VBP1-203ENST00000535916 CD300AQ9UGN4 299 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 DCDC2Q9UHG0 476 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 GNPTGQ9UJJ9 305 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ZNF229Q9UJW7 825 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 ING4Q9UNL4 249 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 V9GY05 133 aa2.2□□□□□ -2.06
VBP1-203ENST00000535916 AQRO60306 1485 aaKnown RBP eCLIP2.2□□□□□ -2.06
VBP1-203ENST00000535916 GOLGA8QA0A0J9YX86 632 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 SMIM28A0A1B0GU29 152 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 A0A1W2PRF3 423 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 A0A1W2PRM7 423 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 RAB19A4D1S5 217 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 A6NIZ1 184 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 ZNF726A6NNF4 738 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 A8MUA0 341 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 H0YHG0 523 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 SLC9A3R1O14745 358 aaPredicted RBP2.19□□□□□ -2.06
VBP1-203ENST00000535916 ERI3O43414 337 aaKnown RBP2.19□□□□□ -2.06
VBP1-203ENST00000535916 XRCC2O43543 280 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 SLC19A2O60779 497 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 SCN2BO60939 215 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 NDUFS6O75380 124 aaKnown RBP2.19□□□□□ -2.06
VBP1-203ENST00000535916 HSBP1O75506 76 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 AQP8O94778 261 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 CST4P01036 141 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 HBE1P02100 147 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 KLK1P06870 262 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 ACSM4P0C7M7 580 aa2.19□□□□□ -2.06
VBP1-203ENST00000535916 FOLR1P15328 257 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms