RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 MTCP1P56278 107 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 RAP1BP61224 184 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 RAP1AP62834 184 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 NLRC3Q7RTR2 1065 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF565Q8N9K5 539 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 SLAMF6Q96DU3 332 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 CDC6Q99741 560 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 GABRG3Q99928 467 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
SCN3B-206ENST00000530277 TSC2P49815 1807 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 F8W036 122 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 STMND1H3BQB6 276 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 MASP2O00187 686 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 RAF1P04049 648 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 QDPRP09417 244 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 ACAA2P42765 397 aaKnown RBP11.15□□□□□ -0.62
SCN3B-206ENST00000530277 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 SLC17A1Q14916 467 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 TOR2AQ5JU69 321 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 GUSBP11Q6P575 273 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 BPHLQ86WA6 291 aaPredicted RBP11.15□□□□□ -0.62
SCN3B-206ENST00000530277 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 ZBTB44Q8NCP5 570 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 AMELYQ99218 206 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 GSX2Q9BZM3 304 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 PPP1R3EQ9H7J1 279 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 EXOGQ9Y2C4 368 aaKnown RBP11.15□□□□□ -0.62
SCN3B-206ENST00000530277 STK17BO94768 372 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 IGHV4-34P06331 123 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 ANKRD34CP0C6C1 535 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 PATE4P0C8F1 98 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 EPHA1P21709 976 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 GDF1P27539 372 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 EFNB2P52799 333 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 CAPZA1P52907 286 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 SPAG16Q8N0X2 631 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 OR10G3Q8NGC4 313 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 SGCZQ96LD1 299 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 GPR84Q9NQS5 396 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 POLE3Q9NRF9 147 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 FRRS1LQ9P0K9 344 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 LRP12Q9Y561 859 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 PKDREJQ9NTG1 2253 aa11.15□□□□□ -0.62
SCN3B-206ENST00000530277 SIGLEC5O15389 551 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 BCKDHBP21953 392 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 S100A11P31949 105 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 GLP1RP43220 463 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 VAMP2P63027 116 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 RNF4P78317 190 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 SIGLEC14Q08ET2 396 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 CLPPQ16740 277 aaPredicted RBP11.15□□□□□ -0.63
SCN3B-206ENST00000530277 ESCO2Q56NI9 601 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 TMEM164Q5U3C3 297 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 DMKNQ6E0U4 476 aaPredicted RBP11.15□□□□□ -0.63
SCN3B-206ENST00000530277 DND1Q8IYX4 353 aaKnown RBP11.15□□□□□ -0.63
SCN3B-206ENST00000530277 SUMF1Q8NBK3 374 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 OR11H7Q8NGC8 314 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 ZNRF4Q8WWF5 429 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 THRSPQ92748 146 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 MARVELD1Q9BSK0 173 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 EIF5A2Q9GZV4 153 aaKnown RBP11.15□□□□□ -0.63
SCN3B-206ENST00000530277 MEMO1Q9Y316 297 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 PCDHGA5Q9Y5G8 931 aa11.15□□□□□ -0.63
SCN3B-206ENST00000530277 GGT3PA6NGU5 568 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 LMO7DNF2Z398 122 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 RER1O15258 196 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 KCNAB3O43448 404 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 TRIM61Q5EBN2 209 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 BEND4Q6ZU67 534 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 GABRG1Q8N1C3 465 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 SORCS2Q96PQ0 1159 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 VRK1Q99986 396 aaPredicted RBP11.14□□□□□ -0.63
SCN3B-206ENST00000530277 MESP1Q9BRJ9 268 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 HRH3Q9Y5N1 445 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 H3BMH7 237 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 ANGPTL7O43827 346 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 IGHA1P01876 353 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 ERGP11308 486 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 ALOX5APP20292 161 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 SLC6A1P30531 599 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 BTG1P62324 171 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 GABREP78334 506 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 FJX1Q86VR8 437 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 MFSD8Q8NHS3 518 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
SCN3B-206ENST00000530277 HAVCR1Q96D42 359 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
SCN3B-206ENST00000530277 JAM3Q9BX67 310 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
SCN3B-206ENST00000530277 A6NLC8 198 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 BET1O15155 118 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 S100A9P06702 114 aaKnown RBP11.14□□□□□ -0.63
SCN3B-206ENST00000530277 LAP3P28838 519 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 DCAF7P61962 342 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 PHLDA2Q53GA4 152 aa11.14□□□□□ -0.63
SCN3B-206ENST00000530277 MESTQ5EB52 335 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms