RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC16A7O60669 478 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 PNPP00491 289 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
CAPN1-208ENST00000527323 ATP1B3P54709 279 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 SSBP1Q04837 148 aaKnown RBP11.25□□□□□ -0.61
CAPN1-208ENST00000527323 EGR4Q05215 589 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 SNTB1Q13884 538 aaKnown RBP11.25□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM225Q6GV28 225 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 RAB12Q6IQ22 244 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 UNQ6126/PRO20091Q6UXV3 157 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 MOB3CQ70IA8 216 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 KCTD9Q7L273 389 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF584Q8IVC4 421 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 INO80EQ8NBZ0 244 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-208ENST00000527323 SLC37A2Q8TED4 501 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 METTL21AQ8WXB1 218 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 SLC25A44Q96H78 314 aaPredicted RBP11.25□□□□□ -0.61
CAPN1-208ENST00000527323 OR8B4Q96RC9 309 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 UBQLN4Q9NRR5 601 aa11.25□□□□□ -0.61
CAPN1-208ENST00000527323 A0A1W2PPC4 97 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 TMEM235A6NFC5 223 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 BCL2L11O43521 198 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 EIF4E2O60573 245 aaKnown RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 GP1BAP07359 652 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 IFI6P09912 130 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 VAMP1P23763 118 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PRKXP51817 358 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 EMC4Q5J8M3 183 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 SLC18B1Q6NT16 456 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 RHOUQ7L0Q8 258 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 AVL9Q8NBF6 648 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 OR5T2Q8NGG2 359 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 SLC6A7Q99884 636 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 SLC17A5Q9NRA2 495 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 RYDENQ9NUL5 291 aaKnown RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 TNFSF18Q9UNG2 199 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PRELID3BQ9Y3B1 194 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 EEF1E1-BLOC1S5C9J1V9 151 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF264O43296 627 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 NDUFA2O43678 99 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 TXNDC12O95881 172 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 GUSBP08236 651 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 CXCR1P25024 350 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 GPR3P46089 330 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 STK11Q15831 433 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PAN3Q58A45 887 aaKnown RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 ACOT7LQ6ZUV0 252 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF679Q8IYX0 411 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 ACBD4Q8NC06 268 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 SLC41A2Q96JW4 573 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 WNT16Q9UBV4 365 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PCDHB10Q9UN67 800 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PRAMEF26H0Y7S4 382 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 GPR31O00270 319 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 SULT1C2O00338 296 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 KCNAB3O43448 404 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 FOXS1O43638 330 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 SLC25A12O75746 678 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 AVPR2P30518 371 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 NUBP1P53384 320 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 FOXL2P58012 376 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PMPCAQ10713 525 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 RNASE10Q5GAN6 216 aaKnown RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 C1QL3Q5VWW1 255 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 HAGHLQ6PII5 290 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 MDGA2Q7Z553 956 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PRR22Q8IZ63 422 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 PIGMQ9H3S5 423 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 GAREM1Q9H706 876 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 B9D1Q9UPM9 204 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF175Q9Y473 711 aa11.24□□□□□ -0.61
CAPN1-208ENST00000527323 MRPS18BQ9Y676 258 aaKnown RBP11.24□□□□□ -0.61
CAPN1-208ENST00000527323 C13orf42A0A1B0GVH6 325 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 C5orf51A6NDU8 294 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 PPIAP62937 165 aaKnown RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 IL13RA1P78552 427 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 EDAQ92838 391 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 MMABQ96EY8 250 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 ZNF587Q96SQ5 575 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 LRRC61Q9BV99 259 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 PURGQ9UJV8 347 aaKnown RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 HCRTR2O43614 444 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 SIGLEC6O43699 453 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 CD8AP01732 235 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 BDKRB2P30411 391 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 RIDAP52758 137 aaKnown RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 EIF2B1Q14232 305 aaKnown RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 MOGAT2Q3SYC2 334 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
CAPN1-208ENST00000527323 KCTD18Q6PI47 426 aaPredicted RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 PAPD4Q6PIY7 484 aaKnown RBP11.23□□□□□ -0.61
CAPN1-208ENST00000527323 OR51A2Q8NGJ7 313 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms