RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 TMEM129A0AVI4 362 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 EFCAB10A6NFE3 127 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 ZAR1LA6NP61 321 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 H3BMQ9 156 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 H7C417 338 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 DCTN6O00399 190 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 IDH3BO43837 385 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 NDUFS7O75251 213 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 PPP1R3DO95685 299 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 RAB36O95755 333 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 IGHV4-39P01824 125 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 CST2P09228 141 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 ZNF32P17041 273 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 NR4A1P22736 598 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 SLC6A6P31641 620 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 ATP5J2P56134 94 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 EFNB3Q15768 340 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 SLC36A2Q495M3 483 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 ZNF362Q5T0B9 420 aaPredicted RBP9.68□□□□□ -0.86
CTSB-214ENST00000527243 XAF1Q6GPH4 301 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 LAIR2Q6ISS4 152 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 ANKRD13BQ86YJ7 626 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 ENTHD1Q8IYW4 607 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 PAQR4Q8N4S7 273 aaPredicted RBP9.68□□□□□ -0.86
CTSB-214ENST00000527243 OR8D4Q8NGM9 314 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 RHOXF1Q8NHV9 184 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 TRUB1Q8WWH5 349 aaKnown RBP9.68□□□□□ -0.86
CTSB-214ENST00000527243 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
CTSB-214ENST00000527243 COG8Q96MW5 612 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 DDOQ99489 341 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 KCNS3Q9BQ31 491 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 CACNG6Q9BXT2 260 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 PLA2G12AQ9BZM1 189 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 SYT4Q9H2B2 425 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 CNOT2Q9NZN8 540 aaKnown RBP9.68□□□□□ -0.86
CTSB-214ENST00000527243 CSPG4Q6UVK1 2322 aa9.68□□□□□ -0.86
CTSB-214ENST00000527243 IGLV1-36A0A0B4J1U3 117 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 IRGMA1A4Y4 181 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 SNTNA6NMZ2 147 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 BHLHE40O14503 412 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 XKRYO14609 159 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 XPNPEP2O43895 674 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 IGFBP1P08833 259 aaPredicted RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 HTR1AP08908 422 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 OR4A8P0C604 315 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 HIST1H1CP16403 213 aaKnown RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 MSR1P21757 451 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 PCMT1P22061 227 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 LAP3P28838 519 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 THBS4P35443 961 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 SERPINF1P36955 418 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 PSG4Q00888 419 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.67□□□□□ -0.86
CTSB-214ENST00000527243 TBCEQ15813 527 aaPredicted RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 KCNMB1Q16558 191 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 SGCAQ16586 387 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 PABPC1L2AQ5JQF8 200 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 SYT6Q5T7P8 510 aaPredicted RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 RPL13AP3Q6NVV1 102 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 LRRC18Q8N456 261 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 CPEB3Q8NE35 698 aaKnown RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 ERMAPQ96PL5 475 aaPredicted RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 NIPSNAP1Q9BPW8 284 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 COPS4Q9BT78 406 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 ZNF416Q9BWM5 594 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 NUAK2Q9H093 628 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 RACGAP1Q9H0H5 632 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 WNT5BQ9H1J7 359 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 C1orf198Q9H425 327 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 PLK3Q9H4B4 646 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 EGLN3Q9H6Z9 239 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 ERVK-18Q9QC07 812 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 PSORS1C1Q9UIG5 152 aa9.67□□□□□ -0.86
CTSB-214ENST00000527243 GDF2Q9UK05 429 aaPredicted RBP9.67□□□□□ -0.86
CTSB-214ENST00000527243 ZANQ9Y493 2812 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 TRIM64BA6NI03 449 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 B9A039 149 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 SLC22A1O15245 554 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 GPRIN2O60269 458 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 SLC16A7O60669 478 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 ICMTO60725 284 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 KHDRBS3O75525 346 aaKnown RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 WBP4O75554 376 aaKnown RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 CDK1P06493 297 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 GAAP10253 952 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 PIPP12273 146 aaPredicted RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 CD99P14209 185 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 FOSL1P15407 271 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 GLRXP35754 106 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 SERPINB10P48595 397 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 SNRPGP62308 76 aaKnown RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 EMX1Q04741 257 aaPredicted RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 SNTB2Q13425 540 aaKnown RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 PTGES3Q15185 160 aaKnown RBP9.66□□□□□ -0.86
CTSB-214ENST00000527243 MEDAGQ5VYS4 303 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 SLX4IPQ5VYV7 408 aa9.66□□□□□ -0.86
CTSB-214ENST00000527243 ZBTB46Q86UZ6 589 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms