RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 EIF1BO60739 113 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 ETHE1O95571 254 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ACSL3O95573 720 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SNAP29O95721 258 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CLIC3O95833 236 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 IFNW1P05000 195 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CRYBA1P05813 215 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 NUDT17P0C025 328 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 H2AFZP0C0S5 128 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PIRTP0C851 137 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SMIM18P0DKX4 95 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 VPREB1P12018 145 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MLNP12872 115 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 NPR2P20594 1047 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MDKP21741 143 aaPredicted RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 UQCRC2P22695 453 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MPZP25189 248 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ATP5A1P25705 553 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 PSMB5P28074 263 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 EVI2BP34910 448 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 GLRXP35754 106 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 COILP38432 576 aaPredicted RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 MNDAP41218 407 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MAGEA6P43360 314 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MTIF2P46199 727 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 ASMTP46597 345 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 INSL3P51460 131 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 EFNB2P52799 333 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TCTAP57738 103 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PRPS1P60891 318 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 BTG2P78543 158 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 GALK2Q01415 458 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PAX2Q02962 417 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ACSM1Q08AH1 577 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 C17orf67Q0P5P2 114 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PLCXD2Q0VAA5 305 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ZNF154Q13106 437 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SELENBP1Q13228 472 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SRSF9Q13242 221 aaKnown RBP eCLIP1.18□□□□□ -2.22
CD44-212ENST00000524922 GABRA6Q16445 453 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PPP1R3AQ16821 1122 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ZNF181Q2M3W8 571 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 VPS26BQ4G0F5 336 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TCP11X2Q5H9J9 407 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SLC35D3Q5M8T2 416 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CTSL3PQ5NE16 218 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 FAM182AQ5T1J6 154 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CPTPQ5TA50 214 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 C6orf163Q5TEZ5 329 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PRAMEF20Q5VT98 475 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CLEC6AQ6EIG7 209 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PTRHD1Q6GMV3 140 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 C11orf63Q6NUN7 778 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 C3orf33Q6P1S2 294 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ALKBH5Q6P6C2 394 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 ZCCHC12Q6PEW1 402 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 AGTRAPQ6RW13 159 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 BTNL3Q6UXE8 466 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 BAIAP2L2Q6UXY1 529 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 B3GLCTQ6Y288 498 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CYHR1Q6ZMK1 362 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 LINC00336Q6ZUF6 198 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 H2AFVQ71UI9 128 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TAS2R42Q7RTR8 314 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PID1Q7Z2X4 250 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 ADCK2Q7Z695 626 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 GALNT10Q86SR1 603 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 LUZP1Q86V48 1076 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SNX32Q86XE0 403 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 HSCBQ8IWL3 235 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MMD2Q8IY49 270 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 RCOR2Q8IZ40 523 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 FAM71E2Q8N5Q1 922 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 KIR3DL3Q8N743 410 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 KLHDC1Q8N7A1 406 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 OR2M3Q8NG83 312 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 OR4K17Q8NGC6 315 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 OR5T3Q8NGG3 340 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 OR10D3Q8NH80 312 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CLDND2Q8NHS1 167 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PIGXQ8TBF5 258 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CD200R1Q8TD46 325 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 UBTD2Q8WUN7 234 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 C10orf82Q8WW14 230 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 RAB1CQ92928 201 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 APH1AQ96BI3 265 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SNF8Q96H20 258 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SLC38A2Q96QD8 506 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 NAT9Q9BTE0 207 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 MAK16Q9BXY0 300 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 LINC00470Q9BZP3 86 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TSGA10Q9BZW7 698 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 HRH4Q9H3N8 390 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TSPY26PQ9H489 355 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 RPF2Q9H7B2 306 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 Q9H8V8 135 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 CNOT10Q9H9A5 744 aaKnown RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 COPS7BQ9H9Q2 264 aaPredicted RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 C3orf14Q9HBI5 128 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TMEM165Q9HC07 324 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms