RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 RER1O15258 196 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 TPD52L2O43399 206 aaKnown RBP10.49□□□□□ -0.73
VEGFA-223ENST00000523125 DCTN3O75935 186 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 FABP3P05413 133 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 MSMBP08118 114 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 CD55P08174 381 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 DBHP09172 617 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 TUBG1P23258 451 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 FPR3P25089 353 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 RRM2P31350 389 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 RBMXP38159 391 aaKnown RBP10.49□□□□□ -0.73
VEGFA-223ENST00000523125 LIPAP38571 399 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 RPS6KA3P51812 740 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 MEP1BQ16820 701 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 RSPO1Q2MKA7 263 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-223ENST00000523125 HFEQ30201 348 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 SPATS1Q496A3 300 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 C1orf94Q6P1W5 598 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 ARL9Q6T311 187 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 Q6ZR03 302 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 GLCCI1Q86VQ1 547 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 OR6V1Q8N148 313 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 FITM2Q8N6M3 262 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 NPEPL1Q8NDH3 523 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 FANK1Q8TC84 345 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 TMEM186Q96B77 213 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 ELMOD3Q96FG2 381 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 SAMD8Q96LT4 415 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 ZNF665Q9H7R5 613 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 LPAR2Q9HBW0 351 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 TUBG2Q9NRH3 451 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 CYSLTR2Q9NS75 346 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-223ENST00000523125 ZDHHC8Q9ULC8 765 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 B9D1Q9UPM9 204 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 GRIP1Q9Y3R0 1128 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 CLDN25C9JDP6 229 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 OR10H3O60404 316 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 IGHV2-5P01817 119 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 HIST1H1CP16403 213 aaKnown RBP10.48□□□□□ -0.73
VEGFA-223ENST00000523125 KITLGP21583 273 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 CRABP1P29762 137 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 SLC6A6P31641 620 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 HMGA2P52926 109 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 MTX3Q5HYI7 312 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 PGBD2Q6P3X8 592 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 C16orf89Q6UX73 402 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 RINLQ6ZS11 566 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 ZBTB46Q86UZ6 589 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 ZDHHC21Q8IVQ6 265 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 SLC26A10Q8NG04 563 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 CCL17Q92583 94 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 MCUR1Q96AQ8 359 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 HAVCR1Q96D42 359 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 CMBLQ96DG6 245 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 DIRC2Q96SL1 478 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 NMNAT3Q96T66 252 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 SRA1Q9HD15 236 aaKnown RBP10.48□□□□□ -0.73
VEGFA-223ENST00000523125 ATPIF1Q9UII2 106 aa10.48□□□□□ -0.73
VEGFA-223ENST00000523125 PURGQ9UJV8 347 aaKnown RBP10.48□□□□□ -0.73
VEGFA-223ENST00000523125 TRAV20A0A0B4J274 112 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 OR6C68A6NDL8 312 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 TIMM8AO60220 97 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-223ENST00000523125 AVPP01185 164 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 GSTM3P21266 225 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ATP6V1B2P21281 511 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 PCMT1P22061 227 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ERFP50548 548 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 COX10Q12887 443 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 TSPAN31Q12999 210 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ZMAT1Q5H9K5 638 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ZNF770Q6IQ21 691 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ACSM5Q6NUN0 579 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 LEG1Q6P5S2 330 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 CORO6Q6QEF8 472 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 CYP2R1Q6VVX0 501 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ZNF620Q6ZNG0 422 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-223ENST00000523125 OR4K13Q8NH42 304 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 OR51F2Q8NH61 342 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 RAB1CQ92928 201 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 PTP4A1Q93096 173 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 CCT8L2Q96SF2 557 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 DDOQ99489 341 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 IFT27Q9BW83 186 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 EGLN1Q9GZT9 426 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 G6PC2Q9NQR9 355 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 DCAF16Q9NXF7 216 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 NDE1Q9NXR1 346 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 ACTR3BQ9P1U1 418 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 LYVE1Q9Y5Y7 322 aa10.47□□□□□ -0.73
VEGFA-223ENST00000523125 TCRBV5S2A0A599 114 aa10.46□□□□□ -0.73
VEGFA-223ENST00000523125 B2RBV5 119 aa10.46□□□□□ -0.73
VEGFA-223ENST00000523125 PLPP2O43688 288 aa10.46□□□□□ -0.73
VEGFA-223ENST00000523125 IDH3BO43837 385 aa10.46□□□□□ -0.73
VEGFA-223ENST00000523125 KRT36O76013 467 aa10.46□□□□□ -0.73
VEGFA-223ENST00000523125 RENP00797 406 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms