RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SLC36A2Q495M3 483 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 PABPC1L2AQ5JQF8 200 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 OR7E24Q6IFN5 339 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 KRT77Q7Z794 578 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
CLK4-210ENST00000522136 CA5BP1Q8WTZ4 195 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 RNF133Q8WVZ7 376 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 ASB5Q8WWX0 329 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 SLC7A6Q92536 515 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 S100PBPQ96BU1 408 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 C1QTNF6Q9BXI9 259 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 B3GNT2Q9NY97 397 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 PLEK2Q9NYT0 353 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 FBXL3Q9UKT7 428 aa11.68□□□□□ -0.54
CLK4-210ENST00000522136 METTL15A6NJ78 407 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 PHYHO14832 338 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ABHD16AO95870 558 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 CCKARP32238 428 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 PSMB10P40306 273 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 OPRL1P41146 370 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 GTF2A1P52655 376 aaPredicted RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 WNT4P56705 351 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 UBE2NP61088 152 aaKnown RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 PCBD1P61457 104 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ROM1Q03395 351 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 EGR3Q06889 387 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 SPHARQ15513 63 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 SLC25A35Q3KQZ1 300 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ALKBH2Q6NS38 261 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 KCTD18Q6PI47 426 aaPredicted RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 TMPRSS11AQ6ZMR5 421 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 C22orf34Q6ZV56 151 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 SYT9Q86SS6 491 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 MDP1Q86V88 176 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 KLBQ86Z14 1044 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 YIPF7Q8N8F6 280 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 CPEB3Q8NE35 698 aaKnown RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 OR52N1Q8NH53 320 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 PELI1Q96FA3 418 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ACOXLQ9NUZ1 547 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 SCOCQ9UIL1 159 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 GRIP1Q9Y3R0 1128 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 LRP12Q9Y561 859 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 OR5H1A6NKK0 313 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 DOK2O60496 412 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 TFAP2AP05549 437 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 KRT8P05787 483 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 H2BFMP0C1H6 154 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 GRNP28799 593 aaKnown RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 UGT2B10P36537 528 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ASCL1P50553 236 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ACTA2P62736 377 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ACTG2P63267 376 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 SCRN3Q0VDG4 424 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 GSG1Q2KHT4 349 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 RSPO1Q2MKA7 263 aaPredicted RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 ELFN2Q5R3F8 820 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 MTFR2Q6P444 385 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ZNF679Q8IYX0 411 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ZFP41Q8N8Y5 198 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
CLK4-210ENST00000522136 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 MROQ9BYG7 248 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ACTR6Q9GZN1 396 aa11.67□□□□□ -0.54
CLK4-210ENST00000522136 ZNF878C9JN71 531 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 C16orf97H3BN30 126 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 SYNGR3O43761 229 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 UBL3O95164 117 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 MT-ND5P03915 603 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 DBHP09172 617 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 APEX1P27695 318 aaKnown RBP11.66□□□□□ -0.54
CLK4-210ENST00000522136 PRKXP51817 358 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 GALK2Q01415 458 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 SNTB1Q13884 538 aaKnown RBP11.66□□□□□ -0.54
CLK4-210ENST00000522136 RAB39AQ14964 217 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 TAF13Q15543 124 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 LIPNQ5VXI9 398 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 SYS1Q8N2H4 156 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
CLK4-210ENST00000522136 HSD17B8Q92506 261 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 ZNF75AQ96N20 296 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 ATF6BQ99941 703 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 HDHD5Q9BXW7 423 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 BABAM2Q9NXR7 383 aa11.66□□□□□ -0.54
CLK4-210ENST00000522136 SPTBN1Q01082 2364 aaKnown RBP11.66□□□□□ -0.54
CLK4-210ENST00000522136 ARPC4-TTLL3A0A0A6YYG9 625 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 SULT1C4O75897 302 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 CELA3BP08861 270 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 CCL2P13500 99 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 PSMB9P28065 219 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 HOXC12P31275 282 aa11.65□□□□□ -0.54
CLK4-210ENST00000522136 ARR3P36575 388 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms