RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 DZANK1Q9NVP4 752 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 LINC00587B1AMM8 73 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR2T1O43869 369 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 TMEM127O75204 238 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADAP1O75689 374 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 EIF3GO75821 320 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 KNG1P01042 644 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 GNB3P16520 340 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 GDI1P31150 447 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 SMAD2Q15796 467 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 FAM209BQ5JX69 171 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 PGAP1Q75T13 922 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC29A4Q7RTT9 530 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF595Q8IYB9 648 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 NMNAT2Q9BZQ4 307 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 THAP10Q9P2Z0 257 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 KLK13Q9UKR3 277 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC17A4Q9Y2C5 497 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 TMEM269A0A1B0GVZ9 245 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 CYR61O00622 381 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 MPIG6BO95866 241 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 PNPP00491 289 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 GJA4P35212 333 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 DEFB115Q30KQ5 88 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 C1QL3Q5VWW1 255 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF679Q8IYX0 411 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR13C8Q8NGS7 320 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 OTOSQ8NHW6 89 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 ASB13Q8WXK3 278 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 MRPS18BQ9Y676 258 aaKnown RBP11.56□□□□□ -0.56
TRAPPC9-208ENST00000520857 MEGF11A6BM72 1044 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OIP5O43482 229 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 PRH1P02810 166 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 RAB6AP20340 208 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 SLC25A1P53007 311 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 PPP1CAP62136 330 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 EGR3Q06889 387 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 C1orf61Q13536 156 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF345Q14585 488 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 EIF2S3LQ2VIR3 472 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 AWAT2Q6E213 333 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 RBMS3Q6XE24 437 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR13C9Q8NGT0 318 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR4K15Q8NH41 348 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 FGGYQ96C11 551 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 WDR92Q96MX6 357 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR8B4Q96RC9 309 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR10A5Q9H207 317 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 RGCCQ9H4X1 137 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 SOHLH2Q9NX45 425 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 LOC107986453A0A1B0GWG9 222 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 LRP3O75074 770 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADCYAP1P18509 176 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 RAB38P57729 211 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 CYCSP99999 105 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZP2Q05996 745 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 MFGE8Q08431 387 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 PJVKQ0ZLH3 352 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 RUNX3Q13761 415 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 SGCAQ16586 387 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 ADAM5Q6NVV9 412 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 BIVMQ86UB2 503 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 SFTPA2Q8IWL1 248 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 EDAQ92838 391 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 ANKRD9Q96BM1 317 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 PIK3IP1Q96FE7 263 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 NRSN2Q9GZP1 204 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 LRRK1Q38SD2 2015 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 TRBV5-7A0A0A0MS05 114 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR2B8PP59922 312 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 CD226Q15762 336 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 KLHL24Q6TFL4 600 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 TMEM184AQ6ZMB5 413 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 TMPPEQ6ZT21 453 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 OR10H5Q8NGA6 315 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 ISOC2Q96AB3 205 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 NECAB3Q96P71 396 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 NUDT9Q9BW91 350 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 SMCO4Q9NRQ5 59 aa11.55□□□□□ -0.56
TRAPPC9-208ENST00000520857 TTLL8A6PVC2 850 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 ZNF264O43296 627 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 EIF4E2O60573 245 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 IFNA4P05014 189 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 CRHP06850 196 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 H2BFMP0C1H6 154 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 NPSR1Q6W5P4 371 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 FRMD1Q8N878 549 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 PMM1Q92871 262 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 AKR1E2Q96JD6 320 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 C5orf34Q96MH7 638 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 TBL1XR1Q9BZK7 514 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 PILRAQ9UKJ1 303 aa11.54□□□□□ -0.56
TRAPPC9-208ENST00000520857 HIF3AQ9Y2N7 669 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms