RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 OR8J1Q8NGP2 316 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 RFESDQ8TAC1 157 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 UBA3Q8TBC4 463 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CNIH3Q8TBE1 160 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 BRSK1Q8TDC3 778 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 RPL3LQ92901 407 aaKnown RBP3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 PELI1Q96FA3 418 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CAPZA3Q96KX2 299 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 OR5B2Q96R09 309 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 NIPSNAP3BQ9BS92 247 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 MAGT1Q9H0U3 335 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 SDF2L1Q9HCN8 221 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC2A8Q9NY64 477 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 PDP1Q9P0J1 537 aaPredicted RBP3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 TMEM181Q9P2C4 612 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 CD84Q9UIB8 345 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 N6AMT1Q9Y5N5 214 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 HERC1Q15751 4861 aa3.74□□□□□ -1.81
HMGB1P23-201ENST00000518743 A0A075B6Q4 140 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC5A10A0PJK1 596 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 A8MXK9 166 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 E7ESA3 106 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 KLRC4O43908 158 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 TIMM8AO60220 97 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZMPSTE24O75844 475 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 IGHG3P01860 377 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 RNH1P13489 461 aaKnown RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 ICAM2P13598 275 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 GABRA1P14867 456 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SELEP16581 610 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SERPINA2P20848 420 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 GALP22466 123 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 HNRNPA3P51991 378 aaKnown RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 OGDHQ02218 1023 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 GNA12Q03113 381 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 CYP24A1Q07973 514 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 PUDPQ08623 228 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 INCA1Q0VD86 236 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SIX1Q15475 284 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 PCK2Q16822 640 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 GGTA1PQ4G0N0 100 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 C6orf226Q5I0X4 101 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SYPL2Q5VXT5 272 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 FAM219BQ5XKK7 198 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 GPR137CQ8N3F9 429 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 C4orf32Q8N8J7 132 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 AQP11Q8NBQ7 271 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 TCTEX1D2Q8WW35 142 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 TMEM80Q96HE8 168 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 CHRDL1Q9BU40 450 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 GON7Q9BXV9 100 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 FAM192AQ9GZU8 254 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLITRK2Q9H156 845 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 ADGRL4Q9HBW9 690 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SH2D2AQ9NP31 389 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 DDIT4Q9NX09 232 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 IMPAD1Q9NX62 359 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 NUDT4Q9NZJ9 180 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 ZNF629Q9UEG4 869 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 SAMD4AQ9UPU9 718 aaKnown RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 PCYT1BQ9Y5K3 369 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 FRAS1Q86XX4 4008 aa3.73□□□□□ -1.81
HMGB1P23-201ENST00000518743 PPIAL4EA0A075B759 164 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 A0A087X002 238 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 A0A096LNT2 108 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 IGHV1-45A0A0A0MS14 117 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 IGHV2-70DA0A0C4DH43 119 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 A0A1B0GX78 115 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 H0YIV9 168 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 IGHV3-9P01782 118 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 PPIAL4FP0DN26 164 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 ELK3P41970 407 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 BDKRB1P46663 353 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 P2RY1P47900 373 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 FNTAP49354 379 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 CASP4P49662 377 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC5A12Q1EHB4 618 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 KLHL38Q2WGJ6 581 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 C2CD6Q53TS8 623 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 DEFB121Q5J5C9 76 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 PRAMEF20Q5VT98 475 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 CARD17Q5XLA6 110 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 PVRIGQ6DKI7 326 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 CYS1Q717R9 158 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 H2BFWTQ7Z2G1 175 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 TPRA1Q86W33 373 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 CRLF3Q8IUI8 442 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 EGFL6Q8IUX8 553 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC35F2Q8IXU6 374 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SVOPLQ8N434 492 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 Q8NBF4 154 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 BBOF1Q8ND07 529 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SPATA4Q8NEY3 305 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 C11orf45Q8TAV5 145 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 MCUR1Q96AQ8 359 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 NTNG2Q96CW9 530 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 COL21A1Q96P44 957 aa3.72□□□□□ -1.81
HMGB1P23-201ENST00000518743 SLC35A5Q9BS91 424 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms