RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ANKRD60Q9BZ19 345 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 TMEM185BQ9H7F4 350 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 C12orf10Q9HB07 376 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 ZDHHC4Q9NPG8 344 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 RAB20Q9NX57 234 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 LYARQ9NX58 379 aaKnown RBP1.74□□□□□ -2.13
SKP1-203ENST00000517625 GGA2Q9UJY4 613 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 SAR1BQ9Y6B6 198 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 PLA2R1Q13018 1463 aa1.74□□□□□ -2.13
SKP1-203ENST00000517625 COL22A1Q8NFW1 1626 aaPredicted RBP1.73□□□□□ -2.13
SKP1-203ENST00000517625 NINLQ9Y2I6 1382 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 A0A075B6Q4 140 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 C7orf66A4D0T2 115 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SMCO2A6NFE2 343 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 TRIM64CA6NLI5 447 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SMKR1H3BMG3 65 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SOCS1O15524 211 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 ZNF207O43670 478 aaKnown RBP1.73□□□□□ -2.13
SKP1-203ENST00000517625 EIF4E2O60573 245 aaKnown RBP1.73□□□□□ -2.13
SKP1-203ENST00000517625 HUS1O60921 280 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 ERLIN1O75477 346 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 CLDN11O75508 207 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 GCM2O75603 506 aaPredicted RBP1.73□□□□□ -2.13
SKP1-203ENST00000517625 APCSP02743 223 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 CTSLP07711 333 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 CD3GP09693 182 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 MYL2P10916 166 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 ATF6P18850 670 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 NPY1RP25929 384 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SYKP43405 635 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 HCAR3P49019 387 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 P2RX1P51575 399 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 PPP1CBP62140 327 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 RPS15P62841 145 aaKnown RBP1.73□□□□□ -2.13
SKP1-203ENST00000517625 CCNA1P78396 465 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 KIR2DS1Q14954 304 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 TRAM2Q15035 370 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 CHRNA6Q15825 494 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 PSMD5Q16401 504 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SMUG1Q53HV7 270 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 PRAMEF20Q5VT98 475 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 AP1ARQ63HQ0 302 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 H3F3CQ6NXT2 135 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SPESP1Q6UW49 350 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 NPSR1Q6W5P4 371 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 SHISA6Q6ZSJ9 500 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 BZW1Q7L1Q6 419 aaKnown RBP1.73□□□□□ -2.13
SKP1-203ENST00000517625 NEGR1Q7Z3B1 354 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 HMGN2P46Q86SG4 172 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 ZNF561Q8N587 486 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 ZNF615Q8N8J6 731 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 GATSQ8NAP1 163 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 CHST4Q8NCG5 386 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 OR5B3Q8NH48 314 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 OR5K2Q8NHB8 316 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 ZNF461Q8TAF7 563 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 OR10C1Q96KK4 312 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 DOK1Q99704 481 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 OSBPL11Q9BXB4 747 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 FAM192AQ9GZU8 254 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 C1orf198Q9H425 327 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 RABL2BQ9UNT1 228 aa1.73□□□□□ -2.13
SKP1-203ENST00000517625 IGLV2-18A0A075B6J9 118 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 IGLV1-36A0A0B4J1U3 117 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 DNASE2O00115 360 aaPredicted RBP1.72□□□□□ -2.13
SKP1-203ENST00000517625 RRP8O43159 456 aaKnown RBP1.72□□□□□ -2.13
SKP1-203ENST00000517625 CDH16O75309 829 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 RBBP9O75884 186 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 SEMA3DO95025 777 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 HLA-DQA1P01909 254 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 CD74P04233 296 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 ADRA2AP08913 450 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 OR56A5P0C7T3 313 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 LINC00869P0C866 280 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 U2AF2P26368 475 aaKnown RBP eCLIP1.72□□□□□ -2.131e-9■■■■□ 21.1
SKP1-203ENST00000517625 TNFSF9P41273 254 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 RAB9AP51151 201 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 EIF3EP60228 445 aaKnown RBP1.72□□□□□ -2.13
SKP1-203ENST00000517625 LIPEQ05469 1076 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 TGM3Q08188 693 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 SELENBP1Q13228 472 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 MOBPQ13875 183 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 RCN1Q15293 331 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 PRSS8Q16651 343 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 HSP90AB3PQ58FF7 597 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 TCEAL5Q5H9L2 206 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 PRMT9Q6P2P2 845 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 PLET1Q6UQ28 207 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 IGFL1Q6UW32 110 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 MBOAT1Q6ZNC8 495 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 NCCRP1Q6ZVX7 275 aaPredicted RBP1.72□□□□□ -2.13
SKP1-203ENST00000517625 MBOAT2Q6ZWT7 520 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 SNX20Q7Z614 316 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 CDKL3Q8IVW4 592 aaPredicted RBP1.72□□□□□ -2.13
SKP1-203ENST00000517625 CMTM1Q8IZ96 169 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 RNF182Q8N6D2 247 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 NPWQ8N729 165 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 TTC29Q8NA56 475 aaPredicted RBP1.72□□□□□ -2.13
SKP1-203ENST00000517625 OR9A2Q8NGT5 310 aa1.72□□□□□ -2.13
SKP1-203ENST00000517625 FAM81AQ8TBF8 368 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms