RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CCDC71LQ8N9Z2 235 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 LFNGQ8NES3 379 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 THAP3Q8WTV1 239 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-203ENST00000517490 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-203ENST00000517490 SAT2Q96F10 170 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-203ENST00000517490 C2orf50Q96LR7 162 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 ELF4Q99607 663 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF426Q9BUY5 554 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 FBXO34Q9NWN3 711 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 LRIT1Q9P2V4 623 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 KCNG2Q9UJ96 466 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 PIKFYVEQ9Y2I7 2098 aa6.04□□□□□ -1.44
CPNE3-203ENST00000517490 DOCK4Q8N1I0 1966 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 TRAV20A0A0B4J274 112 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 A0A1B0GV50 99 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF44P15621 663 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 HNRNPA2B1P22626 353 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 HRH1P35367 487 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF93P35789 620 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 POLR2HP52434 150 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PPP1R1AQ13522 171 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 MLF2Q15773 248 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SGCAQ16586 387 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF74Q16587 644 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 TMEM128Q5BJH2 165 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PABPC1L2AQ5JQF8 200 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 WDR38Q5JTN6 314 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 AKR1C8PQ5T2L2 129 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ATPAF1Q5TC12 328 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SHEQ5VZ18 495 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 Q6ZRG5 221 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 COMMD1Q8N668 190 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 OR9K2Q8NGE7 335 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 DDIT4LQ96D03 193 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CAPNS2Q96L46 248 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 NUDT9Q9BW91 350 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CREBZFQ9NS37 354 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 FLRT3Q9NZU0 649 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CCDC88CQ9P219 2028 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 VSTM2BA6NLU5 285 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 HIDE1A8MVS5 230 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CEACAM5P06731 702 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 H2BFSP57053 126 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 HHEXQ03014 270 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PPA1Q15181 289 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SPIN3Q5JUX0 258 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF425Q6IV72 752 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ABHD12BQ7Z5M8 362 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 C12orf76Q8N812 135 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 GPX8Q8TED1 209 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 FAM71F1Q96KD3 344 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SPIN2AQ99865 258 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SPIN2BQ9BPZ2 258 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CMSS1Q9BQ75 279 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 S1PR5Q9H228 398 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PDE7BQ9NP56 450 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 FRRS1LQ9P0K9 344 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 TBC1D29Q9UFV1 150 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 POMT1Q9Y6A1 747 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 R4GMQ9 66 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 DUS4LO95620 317 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 IFNA5P01569 189 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CISD3P0C7P0 127 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 HOXB3P14651 431 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 RPS27P42677 84 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CDKN2AP42771 156 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 KIAA0141Q14154 515 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SLC22A6Q4U2R8 563 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PRR22Q8IZ63 422 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PRSS35Q8N3Z0 413 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 MARCH1Q8TCQ1 289 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ZNF296Q8WUU4 475 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 NUDCD2Q8WVJ2 157 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 TOX2Q96NM4 488 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 NRTNQ99748 197 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 FGF22Q9HCT0 170 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 KLRF1Q9NZS2 232 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PPP4R1LQ9P1A2 415 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 CYP8B1Q9UNU6 501 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 SLC17A4Q9Y2C5 497 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 OR4C45A6NMZ5 311 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 RAD51DO75771 328 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 IFNA2P01563 188 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 MT-ND4LP03901 98 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 GCH1P30793 250 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 VN1R4Q7Z5H5 301 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 ANGPTL5Q86XS5 388 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 RFLNBQ8N5W9 214 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 RNF128Q8TEB7 428 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 C1orf198Q9H425 327 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 B3GALT5Q9Y2C3 310 aa6.03□□□□□ -1.44
CPNE3-203ENST00000517490 RBM7Q9Y580 266 aaKnown RBP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PUS1Q9Y606 427 aaKnown RBP eCLIP6.03□□□□□ -1.44
CPNE3-203ENST00000517490 PIGBOS1A0A0B4J2F0 54 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 PRSS37A4D1T9 235 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 TTLL8A6PVC2 850 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 J3QRE1 110 aa6.02□□□□□ -1.45
CPNE3-203ENST00000517490 KLF8O95600 359 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-203ENST00000517490 IFNA1P01562 189 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms