RNA–Protein interactions for RNA: ENST00000516130.1

RNU6-1278P-201, Transcript of RNA, U6 small nuclear 1278, pseudogene, humanhuman

BASIC

Gene RNU6-1278P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1278P-201ENST00000516130 RACGAP1Q9H0H5 632 aa0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 C1orf198Q9H425 327 aa0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DHX35Q9H5Z1 703 aaKnown RBP0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 ZNF586Q9NXT0 402 aa0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 PISDQ9UG56 409 aa0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 IKZF2Q9UKS7 526 aa0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 CSDC2Q9Y534 153 aaKnown RBP0.73□□□□□ -2.29
RNU6-1278P-201ENST00000516130 PALLDQ8WX93 1383 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 PRRC2BQ5JSZ5 2229 aaKnown RBP0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 A0A1B0GW55 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 A0A1W2PNN7 141 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 PCP4L1A6NKN8 68 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 L7N2F9 121 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 PPP1R2P9O14990 202 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 NUPL2O15504 423 aaKnown RBP0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 CLIC3O95833 236 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 HLA-DQB1P01920 261 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 CRYGBP07316 175 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DUX4L2P0CJ85 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DUX4L3P0CJ86 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DUX4L5P0CJ88 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DUX4L6P0CJ89 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DUX4L7P0CJ90 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 ZNF250P15622 560 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 MX1P20591 662 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 ME2P23368 584 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 F2RP25116 425 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DCKP27707 260 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 IFNA8P32881 189 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 SYNJ2BPP57105 145 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 TAS2R31P59538 309 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 UBE2NP61088 152 aaKnown RBP0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 RPL23AP62750 156 aaKnown RBP0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 TWF1Q12792 350 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 TGFBIQ15582 683 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 OR7A5Q15622 319 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 TAF9Q16594 264 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 SPIN3Q5JUX0 258 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 THEM4Q5T1C6 240 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 AP1ARQ63HQ0 302 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 SPINT4Q6UDR6 99 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 PRSS58Q8IYP2 241 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 SLC35G3Q8N808 338 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 OR5M1Q8NGP8 315 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 OR2A1Q8NGT9 310 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 OR13G1Q8NGZ3 307 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 OR1P1Q8NH06 330 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 CXorf40AQ8TE69 158 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 STMN2Q93045 179 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 CNDP1Q96KN2 507 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 SLC39A3Q9BRY0 314 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 ZSCAN16Q9H4T2 348 aaPredicted RBP0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 DUX4Q9UBX2 424 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 SUN2Q9UH99 717 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 ZNF391Q9UJN7 358 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 CBY1Q9Y3M2 126 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 LTBP2Q14767 1821 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 ADGRL1O94910 1474 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 VWA8A3KMH1 1905 aa0.72□□□□□ -2.29
RNU6-1278P-201ENST00000516130 BRCA1P38398 1863 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 TRAV6A0A075B6T7 132 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 IGHV7-4-1A0A0J9YVY3 117 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 FAM240BA0A1B0GVZ2 78 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 TMEM120BA0PK00 339 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 ZNF98A6NK75 572 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 NCBP2LA6PVI3 153 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 LRRIQ3A6PVS8 624 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 BTNL10A8MVZ5 291 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 GPR89AB7ZAQ6 455 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 KRBOX1C9JBD0 128 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 H7C417 338 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 UBXN8O00124 270 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 DYNC1I1O14576 645 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 AQP8O94778 261 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 GLSO94925 669 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 LHBP01229 141 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 IGHV3-11P01762 117 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 SERPINA5P05154 406 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 GPR89BP0CG08 455 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 ATF6P18850 670 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 CASP14P31944 242 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 TAGLN2P37802 199 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 SSR1P43307 286 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 HCAR3P49019 387 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 CSNK1EP49674 416 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 TMED10P49755 219 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 GDI2P50395 445 aaKnown RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 PPP1CBP62140 327 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 RBX1P62877 108 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 IFT88Q13099 833 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 PIGHQ14442 188 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 MPV17L2Q567V2 206 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 FAM222AQ5U5X8 452 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 UBE2UQ5VVX9 321 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 CASC1Q6TDU7 716 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 C16orf47Q6ZP98 133 aaPredicted RBP0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 TMEM136Q6ZRR5 245 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 LRP11Q86VZ4 500 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 LIX1Q8N485 282 aa0.71□□□□□ -2.3
RNU6-1278P-201ENST00000516130 COX18Q8N8Q8 333 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms