RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 FGF14Q92915 247 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 CLDN23Q96B33 292 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 SLC38A2Q96QD8 506 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 SECISBP2Q96T21 854 aaKnown RBP2.1□□□□□ -2.07
LINC01088-211ENST00000515597 PARD6BQ9BYG5 372 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 DNTTIP1Q9H147 329 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 YY1AP1Q9H869 796 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 XCL2Q9UBD3 114 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 C2orf16Q68DN1 1984 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 PHF3Q92576 2039 aaKnown RBP2.1□□□□□ -2.07
LINC01088-211ENST00000515597 NID2Q14112 1375 aa2.1□□□□□ -2.07
LINC01088-211ENST00000515597 CACNA1EQ15878 2313 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 OTOGQ6ZRI0 2925 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 ASCC3Q8N3C0 2202 aaKnown RBP2.09□□□□□ -2.07
LINC01088-211ENST00000515597 TMEM150BA6NC51 233 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 GOLGA8SH3BPF8 625 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 MGRN1O60291 552 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 SMIM10L1P0DMW3 83 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 TCN1P20061 433 aaPredicted RBP2.09□□□□□ -2.07
LINC01088-211ENST00000515597 CNR1P21554 472 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 SLC2A5P22732 501 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 DUSP3P51452 185 aaPredicted RBP2.09□□□□□ -2.07
LINC01088-211ENST00000515597 DYNLL1P63167 89 aaKnown RBP2.09□□□□□ -2.07
LINC01088-211ENST00000515597 GNMTQ14749 295 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 PDK3Q15120 406 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 GUCA2BQ16661 112 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 EXOC3L2Q2M3D2 409 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 ZBED5Q49AG3 693 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 XKR4Q5GH76 650 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 OR4F3Q6IEY1 312 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 C19orf35Q6ZS72 473 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 ECHDC2Q86YB7 292 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 Q8N976 141 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 MAGEE2Q8TD90 523 aaPredicted RBP2.09□□□□□ -2.07
LINC01088-211ENST00000515597 ACTRT1Q8TDG2 376 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 CD300LFQ8TDQ1 290 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 DNAJC19Q96DA6 116 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 SMIM10Q96HG1 83 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 BMFQ96LC9 184 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 ZNF641Q96N77 438 aaPredicted RBP2.09□□□□□ -2.07
LINC01088-211ENST00000515597 NPAS2Q99743 824 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 KCNIP3Q9Y2W7 256 aa2.09□□□□□ -2.07
LINC01088-211ENST00000515597 MROH7-TTC4A0A0A0MT08 1334 aa2.09□□□□□ -2.08
LINC01088-211ENST00000515597 ADGRA3Q8IWK6 1321 aa2.09□□□□□ -2.08
LINC01088-211ENST00000515597 LRP4O75096 1905 aa2.09□□□□□ -2.08
LINC01088-211ENST00000515597 PTPRBP23467 1997 aa2.09□□□□□ -2.08
LINC01088-211ENST00000515597 EML5Q05BV3 1969 aa2.09□□□□□ -2.08
LINC01088-211ENST00000515597 MUC22E2RYF6 1773 aaPredicted RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 BSNQ9UPA5 3926 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 LAMA4Q16363 1823 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 PDZD2O15018 2839 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 PCP4L1A6NKN8 68 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 SERPINE3A8MV23 424 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 HAS3O00219 553 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 BET1O15155 118 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 FLOT1O75955 427 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 BGLAPP02818 100 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 UBTFL1P0CB47 393 aaPredicted RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 CSRP1P21291 193 aaKnown RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 RORAP35398 523 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 HSD17B2P37059 387 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 OPRD1P41143 372 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 REG3AQ06141 175 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 SCRN3Q0VDG4 424 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 FZD2Q14332 565 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 CNIH2Q6PI25 160 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 PEX26Q7Z412 305 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 THOC6Q86W42 341 aaKnown RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 OR10G2Q8NGC3 310 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 GEMIN6Q8WXD5 167 aaKnown RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 SMARCD2Q92925 531 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 AURKBQ96GD4 344 aaPredicted RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 COQ2Q96H96 371 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 COPS8Q99627 209 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 MTG1Q9BT17 334 aaPredicted RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 CWH43Q9H720 699 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 LY9Q9HBG7 655 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 SPATA7Q9P0W8 599 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 CGNQ9P2M7 1197 aaKnown RBP2.08□□□□□ -2.08
LINC01088-211ENST00000515597 EPS15L1Q9UBC2 864 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 Q9Y3F1 56 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 LRBAP50851 2863 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 MIA3Q5JRA6 1907 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 AKAP9Q99996 3911 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 FLNCQ14315 2725 aa2.08□□□□□ -2.08
LINC01088-211ENST00000515597 MYO5AQ9Y4I1 1855 aaKnown RBP2.07□□□□□ -2.08
LINC01088-211ENST00000515597 COL6A6A6NMZ7 2263 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 FBN1P35555 2871 aaKnown RBP2.07□□□□□ -2.08
LINC01088-211ENST00000515597 TRAV26-1A0A087WT03 109 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 B4GALT5O43286 388 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 CD5LO43866 347 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 UPK3AO75631 287 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 CTDNEP1O95476 244 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 CLDN9O95484 217 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 IGLV2-23P01705 113 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 CD5P06127 495 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 MRPL3P09001 348 aaKnown RBP2.07□□□□□ -2.08
LINC01088-211ENST00000515597 IGHV3-43DP0DP04 118 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 ZNF30P17039 623 aa2.07□□□□□ -2.08
LINC01088-211ENST00000515597 HOXB8P17481 243 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms