RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CRYAAP02489 173 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 SERPINA5P05154 406 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 GNAO1P09471 354 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 STOMP27105 288 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 NUDT6P53370 316 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 HCCSP53701 268 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 ERVS71-1P61550 626 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 LSM6P62312 80 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 IL5RAQ01344 420 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 HGFACQ04756 655 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 SNTB2Q13425 540 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 EIF2B1Q14232 305 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 C6orf52Q5T4I8 152 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 IZUMO2Q6UXV1 221 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 RFPL4BQ6ZWI9 263 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 DPY19L4Q7Z388 723 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 DCXRQ7Z4W1 244 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 TIGD4Q8IY51 512 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 CELF2-AS1Q8N7Q2 184 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF555Q8NEP9 628 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 OR10S1Q8NGN2 331 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 OR8J1Q8NGP2 316 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 CHAC2Q8WUX2 184 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 APH1BQ8WW43 257 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF582Q96NG8 517 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 ADI1Q9BV57 179 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 CDADC1Q9BWV3 514 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 CDH20Q9HBT6 801 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 PNRC2Q9NPJ4 139 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 CYB5R1Q9UHQ9 305 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 FZR1Q9UM11 496 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 TIMM10BQ9Y5J6 103 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
TOPBP1-209ENST00000513818 A6NJY4 79 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 PRR32B1ATL7 298 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 PSMD9O00233 223 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC16A6O15403 523 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 SYNGR3O43761 229 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 ANOS1P23352 680 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 APLNRP35414 380 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 WNT5AP41221 380 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 GDI2P50395 445 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 PCBD1P61457 104 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 ADARB1P78563 741 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 PLP2Q04941 152 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 RIPK1Q13546 671 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 KEAP1Q14145 624 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 RAB35Q15286 201 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 TBC1D28Q2M2D7 210 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF672Q499Z4 452 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC35D3Q5M8T2 416 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 SPATA46Q5T0L3 261 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 LCN1P1Q5VSP4 162 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF691Q5VV52 312 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 NXNL2Q5VZ03 156 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 MEPCEQ7L2J0 689 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 DPPA2Q7Z7J5 298 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 GID4Q8IVV7 300 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 DHRSXQ8N5I4 330 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 FAM169BQ8N8A8 192 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 OR4F15Q8NGB8 312 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 OR51G2Q8NGK0 314 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 OR2AJ1Q8NGZ0 328 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 CNIH3Q8TBE1 160 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 POM121L2Q96KW2 1035 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 CNN2Q99439 309 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 TBX5Q99593 518 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 VCXQ9H320 206 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 POFUT1Q9H488 388 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 PLEKHF2Q9H8W4 249 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 ADGRL4Q9HBW9 690 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 CENPMQ9NSP4 180 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 COPS3Q9UNS2 423 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 POLQO75417 2590 aa8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 HEATR1Q9H583 2144 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-209ENST00000513818 ROS1P08922 2347 aa8.46□□□□□ -1.05
TOPBP1-209ENST00000513818 OR6C6A6NF89 314 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 SLC22A31A6NKX4 558 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 HS3ST1O14792 307 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 MAGEB4O15481 346 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 SMPD2O60906 423 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF35P13682 527 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 GABRB1P18505 474 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 HTR1FP30939 366 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 THBS4P35443 961 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 CAPGP40121 348 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 HIST1H3AP68431 136 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 GALK2Q01415 458 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ZNF91Q05481 1191 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 MAD2L1BPQ15013 274 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 SMN1Q16637 294 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 ELFN2Q5R3F8 820 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 HIST2H3PS2Q5TEC6 136 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 HIST2H3AQ71DI3 136 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 SSX8Q7RTT4 187 aa8.46□□□□□ -1.06
TOPBP1-209ENST00000513818 SYT9Q86SS6 491 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms