RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 RHOXF1Q8NHV9 184 aa18.18■□□□□ 0.5
NEIL3-202ENST00000513321 LIME1Q9H400 295 aa18.18■□□□□ 0.5
NEIL3-202ENST00000513321 NBPF19A0A087WUL8 3843 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 NR4A1P22736 598 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 NAA10P41227 235 aaPredicted RBP18.17■□□□□ 0.5
NEIL3-202ENST00000513321 GALK2Q01415 458 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 KRT80Q6KB66 452 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 SHFQ7M4L6 423 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 SMAP2Q8WU79 429 aaPredicted RBP18.17■□□□□ 0.5
NEIL3-202ENST00000513321 SLC7A6Q92536 515 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 FBXW5Q969U6 566 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 LURAP1Q96LR2 239 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 APOL4Q9BPW4 351 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 HDHD2Q9H0R4 259 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 SPEF1Q9Y4P9 236 aa18.17■□□□□ 0.5
NEIL3-202ENST00000513321 MPZL2O60487 215 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 ENTPD6O75354 484 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 CLIC3O95833 236 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 MRPL3P09001 348 aaKnown RBP18.16■□□□□ 0.5
NEIL3-202ENST00000513321 GABRB1P18505 474 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 HTR1FP30939 366 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 EIF2B1Q14232 305 aaKnown RBP18.16■□□□□ 0.5
NEIL3-202ENST00000513321 OCLNQ16625 522 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 MEDAGQ5VYS4 303 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 SLC16A9Q7RTY1 509 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 ZNF611Q8N823 705 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 NUP37Q8NFH4 326 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 OR10S1Q8NGN2 331 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 RFKQ969G6 155 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 ADI1Q9BV57 179 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 VCX3BQ9H321 246 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 PNRC2Q9NPJ4 139 aaKnown RBP18.16■□□□□ 0.5
NEIL3-202ENST00000513321 HAO2Q9NYQ3 351 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 WARS2Q9UGM6 360 aaKnown RBP18.16■□□□□ 0.5
NEIL3-202ENST00000513321 RTTNQ86VV8 2226 aa18.16■□□□□ 0.5
NEIL3-202ENST00000513321 APCP25054 2843 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 SETXQ7Z333 2677 aaKnown RBP18.15■□□□□ 0.5
NEIL3-202ENST00000513321 DBHP09172 617 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 CAPGP40121 348 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 HCCSP53701 268 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 NKX6-1P78426 367 aaPredicted RBP18.15■□□□□ 0.5
NEIL3-202ENST00000513321 ECH1Q13011 328 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 SNTB2Q13425 540 aaKnown RBP18.15■□□□□ 0.5
NEIL3-202ENST00000513321 GGTLC2Q14390 218 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 RSPO1Q2MKA7 263 aaPredicted RBP18.15■□□□□ 0.5
NEIL3-202ENST00000513321 VHLLQ6RSH7 139 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 OTOSQ8NHW6 89 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 ST7LQ8TDW4 575 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 COQ7Q99807 217 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 DHRS9Q9BPW9 319 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 ABHD6Q9BV23 337 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 CA10Q9NS85 328 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 CENPMQ9NSP4 180 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 EIF3KQ9UBQ5 218 aaKnown RBP18.15■□□□□ 0.5
NEIL3-202ENST00000513321 ATPIF1Q9UII2 106 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 TACC2O95359 2948 aa18.15■□□□□ 0.5
NEIL3-202ENST00000513321 H0YAE9 185 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 H0YJX3 145 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 FAM157BP0CG42 384 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 PCSK6P29122 969 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 THBS4P35443 961 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 WNT5AP41221 380 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 FABP6P51161 128 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 AQP4P55087 323 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 UCP2P55851 309 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 ZNF691Q5VV52 312 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 ZNF454Q8N9F8 522 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 THEM6Q8WUY1 208 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 SLAMF6Q96DU3 332 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 CNN2Q99439 309 aaKnown RBP18.14■□□□□ 0.49
NEIL3-202ENST00000513321 ATF6BQ99941 703 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 YIPF3Q9GZM5 350 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 OR51B6Q9H340 312 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 CLN6Q9NWW5 311 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 ITPR2Q14571 2701 aa18.14■□□□□ 0.49
NEIL3-202ENST00000513321 RAD52P43351 418 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 IL5RAQ01344 420 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 TMED1Q13445 227 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 C4orf45Q96LM5 186 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 Q96MT0 163 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 AMELYQ99218 206 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 ADGRL4Q9HBW9 690 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEIL3-202ENST00000513321 GRIP1Q9Y3R0 1128 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 SPG11Q96JI7 2443 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 ALOX5APP20292 161 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 APOBEC3AP31941 199 aaPredicted RBP18.13■□□□□ 0.49
NEIL3-202ENST00000513321 GLRXP35754 106 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 ZNF544Q6NX49 715 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 ARL9Q6T311 187 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 C20orf204Q6ZNR8 217 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 SPATC1Q76KD6 591 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 ZNF101Q8IZC7 436 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 OR51G2Q8NGK0 314 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 TFAP2CQ92754 450 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 DDX28Q9NUL7 540 aaKnown RBP18.13■□□□□ 0.49
NEIL3-202ENST00000513321 LAMP5Q9UJQ1 280 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 KLHDC2Q9Y2U9 406 aa18.13■□□□□ 0.49
NEIL3-202ENST00000513321 LRBAP50851 2863 aa18.12■□□□□ 0.49
NEIL3-202ENST00000513321 AKAP6Q13023 2319 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms