RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PTNP21246 168 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CNR1P21554 472 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 PSMA5P28066 241 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 PRDX6P30041 224 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 FOXN2P32314 431 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SHMT2P34897 504 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC26A3P40879 764 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 TRPC1P48995 793 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SPINT3P49223 89 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SULT1E1P49888 294 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SSR4P51571 173 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 GBX2P52951 348 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 MFAP2P55001 183 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 TRA2BP62995 288 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 NAAAQ02083 359 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 IFT88Q13099 833 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 RIPK1Q13546 671 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 RFTN1Q14699 578 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 LTB4RQ15722 352 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 NSDHLQ15738 373 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SFT2D3Q587I9 215 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 SPATA46Q5T0L3 261 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 NCMAPQ5T1S8 102 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 C16orf87Q6PH81 154 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 APOOLQ6UXV4 268 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF600Q6ZNG1 722 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 KIAA1328Q86T90 577 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 MUC15Q8N387 334 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 KIF2BQ8N4N8 673 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CNEP1R1Q8N9A8 125 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 OR51F2Q8NH61 342 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 DLX4Q92988 240 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 NCLNQ969V3 563 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 DNAJC19Q96DA6 116 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 RAB3CQ96E17 227 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 TTC25Q96NG3 672 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF285Q96NJ3 590 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CYTH2Q99418 400 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 TUBGCP2Q9BSJ2 902 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CNPY3Q9BT09 278 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 DEFB126Q9BYW3 111 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 OPN3Q9H1Y3 402 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 CENPHQ9H3R5 247 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 ALG9Q9H6U8 611 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 COG4Q9H9E3 785 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 PDFQ9HBH1 243 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 FANCFQ9NPI8 374 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 DHRS4-AS1Q9P1J3 65 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 OR12D3Q9UGF7 316 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 BOKQ9UMX3 212 aaPredicted RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 MRPS7Q9Y2R9 242 aaKnown RBP2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 PPIL1Q9Y3C6 166 aa2.65□□□□□ -1.99
TOPBP1-208ENST00000511439 MUC4Q99102 2169 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 UQCRHLA0A096LP55 91 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 FAM230AA0A1W2PPH8 454 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF253O75346 499 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 SCGB2A1O75556 95 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 POP7O75817 140 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 PTBP3O95758 552 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 IGHV3-9P01782 118 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 P04436 131 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 THRBP10828 461 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 CYP11B1P15538 503 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 MAGP20916 626 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 PBLDP30039 288 aaPredicted RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 GTF2H1P32780 548 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 SLCO1A2P46721 670 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 GCLMP48507 274 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 DNASE1L1P49184 302 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ARHGDIAP52565 204 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 CHRNB3Q05901 458 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ZP4Q12836 540 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 MRPL28Q13084 256 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 SLC9A3R2Q15599 337 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 CCDC183Q5T5S1 534 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ATAD3BQ5T9A4 648 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 OR2A2Q6IF42 318 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 LRRC8BQ6P9F7 803 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 RTL4Q6ZR62 310 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 GOLGA7Q7Z5G4 137 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ZNF573Q86YE8 665 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 GRAMD2AQ8IUY3 354 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 NELFCDQ8IXH7 590 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 CCDC65Q8IXS2 484 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 OR4S1Q8NGB4 309 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 BRSK1Q8TDC3 778 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ADAMTS16Q8TE57 1224 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 LHX4Q969G2 390 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 STARD4Q96DR4 205 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 NPY6RQ99463 290 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 APOL2Q9BQE5 337 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ERP44Q9BS26 406 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 ACTR6Q9GZN1 396 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 POLR1EQ9GZS1 481 aaKnown RBP2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 CLSTN2Q9H4D0 955 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 XKR8Q9H6D3 395 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 VPS37BQ9H9H4 285 aa2.64□□□□□ -1.99
TOPBP1-208ENST00000511439 LPAR2Q9HBW0 351 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms