RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 DNAJC19Q96DA6 116 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 LRRC39Q96DD0 335 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 CALN1Q9BXU9 219 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 STMN4Q9H169 189 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 GAL3ST2Q9H3Q3 398 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 BEX1Q9HBH7 125 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 MRM3Q9HC36 420 aaKnown RBP3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 CD84Q9UIB8 345 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 DENND4AQ7Z401 1863 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 KMOO15229 486 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF861PO60384 105 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 KLK1P06870 262 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 KRT16P08779 473 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 TPM1P09493 284 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF19P17023 458 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 CNR1P21554 472 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 WARSP23381 471 aaKnown RBP3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 MAS1LP35410 378 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 NUP62P37198 522 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 CSKP41240 450 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 FABP6P51161 128 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 PSMD4P55036 377 aaKnown RBP3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 CLDN6P56747 220 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 TAS2R39P59534 338 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 HERVK_113P61574 105 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 UNC119Q13432 240 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 POU2AF1Q16633 256 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 TMEM183BQ1AE95 376 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 FBXO48Q5FWF7 155 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 TPRG1LQ5T0D9 272 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 SLC25A25Q6KCM7 469 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 C16orf87Q6PH81 154 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 TMEM183AQ8IXX5 376 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR51L1Q8NGJ5 315 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR10G4Q8NGN3 311 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR13C9Q8NGT0 318 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 CA5BP1Q8WTZ4 195 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 APH1BQ8WW43 257 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 RDH5Q92781 318 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 ISOC2Q96AB3 205 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 APH1AQ96BI3 265 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 RNF185Q96GF1 192 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 HAUS4Q9H6D7 363 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 ADAM22Q9P0K1 906 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 PSG8Q9UQ74 426 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 BZW2Q9Y6E2 419 aaKnown RBP3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 ADAMTS9Q9P2N4 1935 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 LTBP1Q14766 1721 aa3.67□□□□□ -1.82
HMGB1P47-201ENST00000511281 PANO1I0J062 215 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 POLR1CO15160 346 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 NEMFO60524 1076 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 SS18L1O75177 396 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 CD1EP15812 388 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 GGT1P19440 569 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 CSNK2A2P19784 350 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 PMCHP20382 165 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 GABRR2P28476 465 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 GABRA6Q16445 453 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 C5orf64Q2M2E5 130 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 ADNP2Q6IQ32 1131 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 VKORC1L1Q8N0U8 176 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 FBXO36Q8NEA4 188 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 MRGPRFQ96AM1 343 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 ELSPBP1Q96BH3 223 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 NRBF2Q96F24 287 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 GPR21Q99679 349 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 AGMATQ9BSE5 352 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 ISYNA1Q9NPH2 558 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 FHOD3Q2V2M9 1422 aa3.66□□□□□ -1.82
HMGB1P47-201ENST00000511281 KLLNB2CW77 178 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 LAD1O00515 517 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 NME4O00746 187 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 TDP2O95551 362 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 PTNP21246 168 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 USF1P22415 310 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 CXCL5P42830 114 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 LHX2P50458 406 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 ATP6V0D1P61421 351 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZSCAN26Q16670 478 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 RSPO1Q2MKA7 263 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 PIGGQ5H8A4 983 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 LIN9Q5TKA1 542 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 FBXW12Q6X9E4 464 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR2W3Q7Z3T1 314 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 HORMAD1Q86X24 394 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZNF547Q8IVP9 402 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 TRAM1L1Q8N609 369 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 ZFP41Q8N8Y5 198 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 CHST4Q8NCG5 386 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR51G1Q8NGK1 321 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 OR6Q1Q8NGQ2 317 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 MCUBQ9NWR8 336 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 DDX19BQ9UMR2 479 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 PIKFYVEQ9Y2I7 2098 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 CAMTA1Q9Y6Y1 1673 aa3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 TET2Q6N021 2002 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P47-201ENST00000511281 IGHV3-74A0A0B4J1X5 117 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 A0A1B0GUA9 196 aa3.64□□□□□ -1.83
HMGB1P47-201ENST00000511281 A0A1W2PRF3 423 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms