RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CRYGCP07315 174 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 AADACP22760 399 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CALCRP30988 508 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MED21Q13503 144 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 GRB7Q14451 532 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 LTB4RQ15722 352 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NPTX1Q15818 432 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CHRFAM7AQ494W8 412 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OGFOD2Q6N063 350 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PLXDC2Q6UX71 529 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PAQR9Q6ZVX9 377 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TFAP2DQ7Z6R9 452 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 UBAC2Q8NBM4 344 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OR2T11Q8NH01 316 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PRSS3P2Q8NHM4 247 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FAM110BQ8TC76 370 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TFGQ92734 400 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PSMG2Q969U7 264 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SLC41A3Q96GZ6 507 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OR2D2Q9H210 308 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NEUROG2Q9H2A3 272 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TIGARQ9NQ88 270 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FBXO6Q9NRD1 293 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SDR39U1Q9NRG7 319 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SSR3Q9UNL2 185 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 A0A087WV48 116 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OR5B21A6NL26 309 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 E7EQ34 232 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 KLRC4-KLRK1H3BQV0 150 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 K7EPK0 472 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SGK494L7N484 410 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 LRP3O75074 770 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 DHRS3O75911 302 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SPNP16150 400 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ME2P23368 584 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MPLP40238 635 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SERPINB10P48595 397 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PLP1P60201 277 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NCALDP61601 193 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PITX1P78337 314 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 KLF5Q13887 457 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 KIAA0141Q14154 515 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ELAVL3Q14576 367 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SGCAQ16586 387 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 UBE2NLQ5JXB2 153 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NSUN5P2Q63ZY6 315 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NCBP2-AS2Q69YL0 99 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TMIGD1Q6UXZ0 262 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MDGA2Q7Z553 956 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NAXDQ8IW45 347 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 LRRC56Q8IYG6 542 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FAM71E2Q8N5Q1 922 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TEX26Q8N6G2 289 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF548Q8NEK5 533 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 C1orf54Q8WWF1 131 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF689Q96CS4 500 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NODALQ96S42 347 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 WACQ9BTA9 647 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OR52A5Q9H2C5 316 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 KIR3DX1Q9H7L2 352 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM181Q9P2C4 612 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CLEC2DQ9UHP7 191 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MRM2Q9UI43 246 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PEX16Q9Y5Y5 336 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MIA3Q5JRA6 1907 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 A0A1B0GUS0 222 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF217O75362 1048 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SEMA4FO95754 770 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CCL5P13501 91 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 LMO2P25791 158 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 NKX2-5P52952 324 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SNRPD1P62314 119 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 IZUMO4Q1ZYL8 232 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 FNDC7Q5VTL7 733 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 RSBN1Q5VWQ0 802 aaPredicted RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 DNM1P34Q6PK57 102 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 LINGO4Q6UY18 593 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 PRUNE1Q86TP1 453 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ADGRG3Q86Y34 549 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 OR1F12Q8NHA8 337 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 SETD7Q8WTS6 366 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM255BQ8WV15 326 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 EXTL1Q92935 676 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM203Q969S6 136 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 C8orf44Q96CB5 159 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CSF3RQ99062 836 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 C12orf10Q9HB07 376 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM45AQ9NWC5 275 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 ASIC5Q9NY37 505 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 CSDC2Q9Y534 153 aaKnown RBP3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MAB21L2Q9Y586 359 aa3.51□□□□□ -1.85
NEDD4-209ENST00000508871 MTCL1Q9Y4B5 1905 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 RIIAD1A6NNX1 92 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 C1QTNF3-AMACRE9PGA6 284 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SAP30O75446 220 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 IGLV3-27P01718 113 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 RBP1P09455 135 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 THRAP10827 490 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 SHMT2P34897 504 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms