RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 OVOS2A0A0G2JMS6 1433 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 OVOS2A0A0J9YW53 1432 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 NAIPQ13075 1403 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 UHRF1BP1Q6BDS2 1440 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 OVOS2Q6IE36 1432 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 ADGRL3Q9HAR2 1447 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 SF3B1O75533 1304 aaKnown RBP eCLIP1.43□□□□□ -2.184e-6■■■■■ 34.5
NUP54-208ENST00000508604 LRRK1Q38SD2 2015 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 SYNJ2O15056 1496 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 MAGI2Q86UL8 1455 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 ARHGAP35Q9NRY4 1499 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 MLH3Q9UHC1 1453 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 TRPM1Q7Z4N2 1603 aa1.43□□□□□ -2.18
NUP54-208ENST00000508604 YLPM1P49750 1951 aaKnown RBP1.43□□□□□ -2.18
NUP54-208ENST00000508604 A0A1B0GV72 72 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C13orf42A0A1B0GVH6 325 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SAGE2PA6NJ88 616 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 HACD1B0YJ81 288 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CLDN25C9JDP6 229 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 F8WDY8 70 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 I3L521 148 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 M0QYV0 167 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PRMT5O14744 637 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 SCAMP2O15127 329 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 CFLARO15519 480 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 DLEU1O43261 78 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PSTPIP1O43586 416 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 LCMT2O60294 686 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 FADS1O60427 444 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 UGT1A9O60656 530 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 RAD51DO75771 328 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 POP7O75817 140 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 SNAPC5O75971 98 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SRP72O76094 671 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 H6PDO95479 791 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TDP2O95551 362 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PTTG1O95997 202 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MT-ATP6P00846 226 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SERPINA3P01011 423 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C2P06681 752 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 KLK3P07288 261 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 APRTP07741 180 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NBEAP1P0C6P0 100 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZNF806P0C7X5 589 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NQO2P16083 231 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MAGP20916 626 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CNR1P21554 472 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 DRD5P21918 477 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ME2P23368 584 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ATP5A1P25705 553 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 MARCKSP29966 332 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 RPL35P42766 123 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 GABRA4P48169 554 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 IDH3GP51553 393 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 SLC7A9P82251 487 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 VLDLRP98155 873 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 IL9RQ01113 521 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SEMG2Q02383 582 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PAX5Q02548 391 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 IRF8Q02556 426 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 GABPAQ06546 454 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TGM3Q08188 693 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 FGL1Q08830 312 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 BST2Q10589 180 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 BIKQ13323 160 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 IQGAP2Q13576 1575 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 GRB7Q14451 532 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 P2RY14Q15391 338 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SPHARQ15513 63 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TRIP10Q15642 601 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PSG3Q16557 428 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 HAGHQ16775 308 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MICBQ29980 383 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C5orf64Q2M2E5 130 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 BSXQ3C1V8 233 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 BEX5Q5H9J7 111 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PABPC1L2AQ5JQF8 200 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 OR2B11Q5JQS5 317 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C6orf52Q5T4I8 152 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 DCAF12Q5T6F0 453 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 N4BP2L1Q5TBK1 243 aaPredicted RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 TIGD3Q6B0B8 471 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZNF470Q6ECI4 717 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MED27Q6P2C8 311 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 CES3Q6UWW8 571 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 TMEM26Q6ZUK4 368 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SLC35D2Q76EJ3 337 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SSH2Q76I76 1423 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PID1Q7Z2X4 250 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 C16orf62Q7Z3J2 963 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ANGPTL5Q86XS5 388 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZNF573Q86YE8 665 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 RBM45Q8IUH3 476 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 ZBTB8OSQ8IWT0 167 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 PRSS58Q8IYP2 241 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 SELENOHQ8IZQ5 122 aaKnown RBP1.42□□□□□ -2.18
NUP54-208ENST00000508604 RDH10Q8IZV5 341 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 MTURNQ8N3F0 131 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 NECAB1Q8N987 351 aa1.42□□□□□ -2.18
NUP54-208ENST00000508604 OR4L1Q8NH43 312 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms