RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PSG7Q13046 419 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 CDK5R2Q13319 367 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 KCNMB1Q16558 191 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 AVPI1Q5T686 147 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 SMARCD3Q6STE5 483 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 VASH1Q7L8A9 365 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 MEX3DQ86XN8 651 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 GJC3Q8NFK1 279 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 ELAC2Q9BQ52 826 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 HDHD2Q9H0R4 259 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 SYT4Q9H2B2 425 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 EMC7Q9NPA0 242 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 G6PC2Q9NQR9 355 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 IL19Q9UHD0 177 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 PURGQ9UJV8 347 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 POLR1DQ9Y2S0 133 aa12.24□□□□□ -0.45
HMGCS1-203ENST00000507004 FBN3Q75N90 2809 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 H7C1C5 153 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 HAX1O00165 279 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 WNT9BO14905 357 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 ARPC3O15145 178 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 PLPP2O43688 288 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 IDH3BO43837 385 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 HSD17B1P14061 328 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 NCK1P16333 377 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 SLC6A6P31641 620 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 LCN6P62502 163 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 SLC36A3Q495N2 470 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 TMEM155Q4W5P6 130 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 SAMD4BQ5PRF9 694 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 DCAF12L2Q5VW00 463 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 OR1F12Q8NHA8 337 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 NANPQ8TBE9 248 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 HAVCR1Q96D42 359 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 PYURFQ96I23 114 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 C7orf34Q96L11 122 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 COQ7Q99807 217 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 GMPR2Q9P2T1 348 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 ASH2LQ9UBL3 628 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 EGFL7Q9UHF1 273 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 IER3IP1Q9Y5U9 82 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 NPTNQ9Y639 398 aa12.23□□□□□ -0.45
HMGCS1-203ENST00000507004 ISPDA4D126 451 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 TRIM77I1YAP6 450 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 SNX3O60493 162 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 GADD45GO95257 159 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 RENP00797 406 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 ECH1Q13011 328 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 RPL13AP3Q6NVV1 102 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 C1QL2Q7Z5L3 287 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 TSEN54Q7Z6J9 526 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 CPLX4Q7Z7G2 160 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 JAZF1Q86VZ6 243 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 PGAM4Q8N0Y7 254 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 MUC20Q8N307 709 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 KLHL36Q8N4N3 616 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 LINC00471Q8N535 108 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 ZNF283Q8N7M2 679 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 POP5Q969H6 163 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 NSMCE2Q96MF7 247 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 SUCNR1Q9BXA5 334 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 NUAK2Q9H093 628 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 TMEM106BQ9NUM4 274 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 TMCC3Q9ULS5 477 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 PCDHB10Q9UN67 800 aa12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 COA3Q9Y2R0 106 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-203ENST00000507004 WNK2Q9Y3S1 2297 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 SOCS2O14508 198 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 SELEP16581 610 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 ZNF26P17031 533 aaPredicted RBP12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 EPHA1P21709 976 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 FUT4P22083 530 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 FPR3P25089 353 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 FPR2P25090 351 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 MNAT1P51948 309 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 RFX4Q33E94 735 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 FBXW12Q6X9E4 464 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 OR2Z1Q8NG97 314 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 OR13G1Q8NGZ3 307 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 CMBLQ96DG6 245 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 RERGLQ9H628 205 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 MSL2Q9HCI7 577 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 KCNG2Q9UJ96 466 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 NOP16Q9Y3C1 178 aaKnown RBP12.21□□□□□ -0.45
HMGCS1-203ENST00000507004 KRT36O76013 467 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 FSTL3O95633 263 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 SCG5P05408 212 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 FABP3P05413 133 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 NOS3P29474 1203 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 SRP9P49458 86 aaKnown RBP12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 HILS1P60008 231 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 HIST1H3AP68431 136 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 SPIBQ01892 262 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 COX10Q12887 443 aa12.2□□□□□ -0.46
HMGCS1-203ENST00000507004 HIST2H3PS2Q5TEC6 136 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms