RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 CGGBP1Q9UFW8 167 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 DHDHQ9UQ10 334 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 MRPS2Q9Y399 296 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 GPANK1O95872 356 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 PNPP00491 289 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 F13BP05160 661 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 AKR1C4P17516 323 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 FSTP19883 344 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 LPAR6P43657 344 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 GPR18Q14330 331 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 EMC4Q5J8M3 183 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 ACER2Q5QJU3 275 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 DHRS11Q6UWP2 260 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 FJX1Q86VR8 437 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 LCN9Q8WX39 176 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 PPP1R14AQ96A00 147 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 PTX4Q96A99 478 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 NECAB3Q96P71 396 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 PHPT1Q9NRX4 125 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 TAS2R4Q9NYW5 299 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 GRHPRQ9UBQ7 328 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 CKLFQ9UBR5 152 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 FANCMQ8IYD8 2048 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 NUDT21O43809 227 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 FBXO24O75426 580 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 ADH1AP07327 375 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 DRD3P35462 400 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 CSNK1EP49674 416 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 SGCAQ16586 387 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 MEP1BQ16820 701 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF260Q3ZCT1 412 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 AQP10Q96PS8 301 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 TSPAN32Q96QS1 320 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 CMKLR1Q99788 373 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 PAPOLGQ9BWT3 736 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 WRBO00258 174 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 CLN5O75503 358 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 KAT7O95251 611 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 CSTAP01040 98 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 OR8U8P0C7N1 319 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 ASAH2BP0C7U1 165 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 S1PR1P21453 382 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 ADPRHP54922 357 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 FAM76BQ5HYJ3 339 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 BTNL8Q6UX41 500 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 RNF44Q7L0R7 432 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 OR5T3Q8NGG3 340 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 FLVCR1-AS1Q8TAF5 88 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 TMEM41AQ96HV5 264 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 TAAR9Q96RI9 348 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 SPACA6W5XKT8 324 aa15.36■□□□□ 0.05
SQSTM1-211ENST00000506690 CD80P33681 288 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 PPM1AP35813 382 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 PGDP52209 483 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 OR52W1Q6IF63 320 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 PRSS54Q6PEW0 395 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 TMEM184AQ6ZMB5 413 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 TRAPPC6BQ86SZ2 158 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 GVQW1Q8N7I0 195 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 SUSD6Q92537 303 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 ANKRD9Q96BM1 317 aaPredicted RBP15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 OR5B2Q96R09 309 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 LPAR4Q99677 370 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 SULT4A1Q9BR01 284 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 TUBA4BQ9H853 241 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 MMP25Q9NPA2 562 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 SLC17A4Q9Y2C5 497 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 POMT1Q9Y6A1 747 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 ADH1CP00326 375 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 ST6GAL1P15907 406 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 EIF2B1Q14232 305 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 COL19A1Q14993 1142 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNHIT3Q15649 155 aaPredicted RBP15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 SLC22A6Q4U2R8 563 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF679Q8IYX0 411 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 C10orf53Q8N6V4 93 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 OR51A2Q8NGJ7 313 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 KIRREL1Q96J84 757 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF285Q96NJ3 590 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 KXD1Q9BQD3 176 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 SLC5A7Q9GZV3 580 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 DZANK1Q9NVP4 752 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 HEBP2Q9Y5Z4 205 aa15.35■□□□□ 0.05
SQSTM1-211ENST00000506690 DCDC2BA2VCK2 349 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 SERINC4A6NH21 518 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 RAB27BO00194 218 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 TXNL1O43396 289 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 RENP00797 406 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 CD2P06729 351 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 HRH1P35367 487 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 EIF2S3P41091 472 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 AKR1C3P42330 323 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 DVL1P1P54792 670 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 RPL18Q07020 188 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 ENPP2Q13822 863 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 ACBD4Q8NC06 268 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 ROBO4Q8WZ75 1007 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 MRPL38Q96DV4 380 aaKnown RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 CCNL2Q96S94 520 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 OR5AC2Q9NZP5 309 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms