RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 REV1Q9UBZ9 1251 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 AP4S1Q9Y587 144 aa11.27□□□□□ -0.61
TCOF1-209ENST00000506630 A0A1W2PPW3 197 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 TMEM129A0AVI4 362 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 RIIAD1A6NNX1 92 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 LY6HO94772 140 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 FAM157CP0CG43 387 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 FCGR1AP12314 374 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 OSMP13725 252 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF23P17027 643 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF3P17036 446 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 GRK5P34947 590 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 WNT5AP41221 380 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 EFNA4P52798 201 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 UCP2P55851 309 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 TEKQ02763 1124 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 RFPL4BQ6ZWI9 263 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 VASH1Q7L8A9 365 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-209ENST00000506630 LRP11Q86VZ4 500 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 LINC00346Q8IVM7 164 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF101Q8IZC7 436 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 SLC26A10Q8NG04 563 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 OR51L1Q8NGJ5 315 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 OR2T4Q8NH00 348 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 LRTOMTQ8WZ04 291 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 OTULINQ96BN8 352 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 NRBF2Q96F24 287 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 DUS3LQ96G46 650 aaKnown RBP11.26□□□□□ -0.61
TCOF1-209ENST00000506630 DOK1Q99704 481 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 CDADC1Q9BWV3 514 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 RAB1BQ9H0U4 201 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 MYEF2Q9P2K5 600 aaKnown RBP11.26□□□□□ -0.61
TCOF1-209ENST00000506630 DUSP13Q9UII6 198 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
TCOF1-209ENST00000506630 LHFPL6Q9Y693 200 aa11.26□□□□□ -0.61
TCOF1-209ENST00000506630 TVP23AA6NH52 213 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 M0R233 179 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 RER1O15258 196 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ABHD16AO95870 558 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 TFP02787 698 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 GYPBP06028 91 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ERCC1P07992 297 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-209ENST00000506630 COX5BP10606 129 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ALDH3B1P43353 468 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 EVX1P49640 407 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 SELENOVP59797 346 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 GINS1Q14691 196 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 MAD2L1BPQ15013 274 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ALKBH6Q3KRA9 238 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 CCDC92Q53HC0 331 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF362Q5T0B9 420 aaPredicted RBP11.25□□□□□ -0.61
TCOF1-209ENST00000506630 SPATA46Q5T0L3 261 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 SLC27A4Q6P1M0 643 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 CORO6Q6QEF8 472 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 UNQ6126/PRO20091Q6UXV3 157 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 AMIGO2Q86SJ2 522 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF525Q8N782 197 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 GJC3Q8NFK1 279 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ABHD4Q8TB40 342 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 SYNPRQ8TBG9 265 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 PYDC1Q8WXC3 89 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 DNAJC9Q8WXX5 260 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 SLC7A6Q92536 515 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 C4orf45Q96LM5 186 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 DDOQ99489 341 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 RBM4Q9BWF3 364 aaKnown RBP11.25□□□□□ -0.61
TCOF1-209ENST00000506630 SEMA6AQ9H2E6 1030 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 TPK1Q9H3S4 243 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 ELOVL3Q9HB03 270 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 PAPOLBQ9NRJ5 636 aaKnown RBP11.25□□□□□ -0.61
TCOF1-209ENST00000506630 CMC2Q9NRP2 79 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 CDC42EP3Q9UKI2 254 aa11.25□□□□□ -0.61
TCOF1-209ENST00000506630 FAM183AA6NL82 134 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 G3V2T6 193 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 SYNGR3O43761 229 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 CLPTM1O96005 669 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ADRA2AP08913 450 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 CLUP10909 449 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ZNF823P16415 610 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 SPI1P17947 270 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 KLF3P57682 345 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ACTR3P61158 418 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 KPNB1Q14974 876 aaKnown RBP11.24□□□□□ -0.61
TCOF1-209ENST00000506630 CARTPTQ16568 116 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 NKPD1Q17RQ9 610 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ACSM5Q6NUN0 579 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 TMEM154Q6P9G4 183 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ARL9Q6T311 187 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 LYPD4Q6UWN0 246 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
TCOF1-209ENST00000506630 OR6K6Q8NGW6 343 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 OR2AJ1Q8NGZ0 328 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 OR1F12Q8NHA8 337 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 SLC25A40Q8TBP6 338 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 ZNRF4Q8WWF5 429 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 RHNO1Q9BSD3 238 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
TCOF1-209ENST00000506630 MED20Q9H944 212 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms