RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FAM81AQ8TBF8 368 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 GGHQ92820 318 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 CNN2Q99439 309 aaKnown RBP7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 CELSR2Q9HCU4 2923 aa7.15□□□□□ -1.26
CDC42SE2-208ENST00000505065 SELENOFO60613 162 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 SMPD2O60906 423 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 FSTL3O95633 263 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 MMP16P51512 607 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 SCRN3Q0VDG4 424 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF529Q6P280 563 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 TMEM53Q6P2H8 277 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF555Q8NEP9 628 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR4F15Q8NGB8 312 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR9Q1Q8NGQ5 310 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR1F12Q8NHA8 337 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 HAVCR2Q8TDQ0 301 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 TEX12Q9BXU0 123 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 MRM2Q9UI43 246 aaKnown RBP7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 SH3BGRL2Q9UJC5 107 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 IRGMA1A4Y4 181 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 DHRS7CA6NNS2 312 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLC1A7O00341 560 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 RAD51DO75771 328 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 AGFG2O95081 481 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 NR4A1P22736 598 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 KIR2DL3P43628 341 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 MTNR1AP48039 350 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 ACTC1P68032 377 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 ACTA1P68133 377 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 MEP1BQ16820 701 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZIK1Q3SY52 487 aaPredicted RBP7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 IL4I1Q96RQ9 567 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 KCNJ15Q99712 375 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 ABHD6Q9BV23 337 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 CXXC4Q9H2H0 198 aa7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 PLEKHB1Q9UF11 243 aaPredicted RBP7.15□□□□□ -1.27
CDC42SE2-208ENST00000505065 A0A0U1RQV5 110 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 FAM20BO75063 409 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 SMNDC1O75940 238 aaKnown RBP eCLIP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 PTHP01270 115 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 IGHV3-9P01782 118 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 FMO3P31513 532 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 GRB2P62993 217 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 MRPL28Q13084 256 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 SP5Q6BEB4 398 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 C8orf59Q8N0T1 100 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR52N1Q8NH53 320 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 TMEM171Q8WVE6 324 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 MARS2Q96GW9 593 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 VCXQ9H320 206 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 NIPAL2Q9H841 368 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 EMC7Q9NPA0 242 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 YLPM1P49750 1951 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 COL12A1Q99715 3063 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 EEF1E1-BLOC1S5C9J1V9 151 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 EEF1E1O43324 174 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 SC5DO75845 299 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 CDK1P06493 297 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 KCTD21Q4G0X4 260 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 PABPC1L2AQ5JQF8 200 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 KCTD20Q7Z5Y7 419 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 NINJ1Q92982 152 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ERVK13-1Q9NX77 482 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ST6GALNAC2Q9UJ37 374 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 RPL36Q9Y3U8 105 aaKnown RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF878C9JN71 531 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF593O00488 134 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 OGG1O15527 345 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 CAPZA2P47755 286 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 CCR9P51686 369 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZBTB37Q5TC79 503 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 CATSPERDQ86XM0 798 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLC35F2Q8IXU6 374 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 PLK3Q9H4B4 646 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF696Q9H7X3 374 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 MOB1AQ9H8S9 216 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 V9GYS6 101 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 APCP25054 2843 aa7.14□□□□□ -1.27
CDC42SE2-208ENST00000505065 ATE1O95260 518 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CD8AP01732 235 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CD55P08174 381 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CFPP27918 469 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CDH11P55287 796 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 RAB1AP62820 205 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 BSPH1Q075Z2 132 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR8B8Q15620 311 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 TMEM42Q69YG0 159 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CRIP3Q6Q6R5 217 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 DRAM2Q6UX65 266 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF679Q8IYX0 411 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 CNIH3Q8TBE1 160 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 NSMAFQ92636 917 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 POFUT1Q9H488 388 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ASH1LQ9NR48 2969 aaKnown RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF391Q9UJN7 358 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 TMEM14AQ9Y6G1 99 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 LRBAP50851 2863 aa7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 A0A1W2PQL4 384 aaPredicted RBP7.13□□□□□ -1.27
CDC42SE2-208ENST00000505065 GYPBP06028 91 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms