RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 KCTD18Q6PI47 426 aaPredicted RBP17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 SNX33Q8WV41 574 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 RNF133Q8WVZ7 376 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 MUCL1Q96DR8 90 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 ALG8Q9BVK2 526 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 WNT5BQ9H1J7 359 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 OR10A4Q9H209 315 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 AMDHD2Q9Y303 409 aa17.78■□□□□ 0.44
CDC42SE2-206ENST00000503291 J3QKU1 62 aa17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 SRSF1Q07955 248 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 ELFN2Q5R3F8 820 aa17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 RNLSQ5VYX0 342 aa17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 VASH1Q7L8A9 365 aaPredicted RBP17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 ALDH16A1Q8IZ83 802 aa17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 CPEB3Q8NE35 698 aaKnown RBP17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 HSD17B8Q92506 261 aa17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 C1QTNF6Q9BXI9 259 aa17.77■□□□□ 0.44
CDC42SE2-206ENST00000503291 MRPS14O60783 128 aaKnown RBP17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 ROM1Q03395 351 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 EGR3Q06889 387 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 PRR14LQ5THK1 2151 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 LRRN1Q6UXK5 716 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 TSPAN14Q8NG11 270 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF75AQ96N20 296 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR8B4Q96RC9 309 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 MROQ9BYG7 248 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 SLCO1C1Q9NYB5 712 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 IKZF2Q9UKS7 526 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 ERGIC3Q9Y282 383 aa17.77■□□□□ 0.43
CDC42SE2-206ENST00000503291 RTTNQ86VV8 2226 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 DOK2O60496 412 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 RNF224P0DH78 156 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 SNTB1Q13884 538 aaKnown RBP17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 IRF3Q14653 427 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 RAB35Q15286 201 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF684Q5T5D7 378 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF773Q6PK81 442 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 RHOUQ7L0Q8 258 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 KRT77Q7Z794 578 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 SPARTQ8N0X7 666 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 MRM2Q9UI43 246 aaKnown RBP17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 MAGEA13PA6NCF6 341 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF878C9JN71 531 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 SYNGR3O43761 229 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 CBR1P16152 277 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 OPRL1P41146 370 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR12D2P58182 307 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 PLP2Q04941 152 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 RAB39AQ14964 217 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 PPA1Q15181 289 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 CDONQ4KMG0 1287 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR2G6Q5TZ20 316 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ALKBH2Q6NS38 261 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF584Q8IVC4 421 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF679Q8IYX0 411 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 WFIKKN1Q96NZ8 548 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ATF6BQ99941 703 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 HDHD2Q9H0R4 259 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 ISG20L2Q9H9L3 353 aaKnown RBP17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 DDX28Q9NUL7 540 aaKnown RBP17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 CAB39Q9Y376 341 aaPredicted RBP17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 SNX5Q9Y5X3 404 aa17.76■□□□□ 0.43
CDC42SE2-206ENST00000503291 USP9XQ93008 2570 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 SERPINA5P05154 406 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 H2BFMP0C1H6 154 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 PPP3CBP16298 524 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 ACTA2P62736 377 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 ACTG2P63267 376 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 SORDQ00796 357 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 TP53I3Q53FA7 332 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 DEGS2Q6QHC5 323 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 PLEKHG7Q6ZR37 379 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 KLHL36Q8N4N3 616 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 NANOGP1Q8N7R0 232 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 OR1F12Q8NHA8 337 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 MS4A3Q96HJ5 214 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 C4orf36Q96KX1 117 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 MYCBPQ99417 103 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 ELOVL3Q9HB03 270 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 NPDC1Q9NQX5 325 aaPredicted RBP17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 HCFC1P51610 2035 aa17.75■□□□□ 0.43
CDC42SE2-206ENST00000503291 J3QLW9 94 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 MYL12BO14950 172 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 SULT1C4O75897 302 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 IGKV3-15P01624 115 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 KRT8P05787 483 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZNF19P17023 458 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 APEX1P27695 318 aaKnown RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 MAP2K4P45985 399 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 HTR5AP47898 357 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 EMX1Q04741 257 aaPredicted RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 TAF13Q15543 124 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 C1QTNF12Q5T7M4 302 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 TMPRSS11AQ6ZMR5 421 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 SLC7A6Q92536 515 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 MRPL48Q96GC5 212 aaKnown RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 ZC3HAV1LQ96H79 300 aaKnown RBP17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 MED18Q9BUE0 208 aa17.74■□□□□ 0.43
CDC42SE2-206ENST00000503291 GNG8Q9UK08 70 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 758.7 ms