RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 IGHV2-5P01817 119 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 SEMG1P04279 462 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 ARHGDIAP52565 204 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 SCRN3Q0VDG4 424 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 GPR139Q6DWJ6 353 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 ACSM5Q6NUN0 579 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 C1orf94Q6P1W5 598 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 GLB1L2Q8IW92 636 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 RFLNBQ8N5W9 214 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 ELMOD3Q96FG2 381 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 ELOVL3Q9HB03 270 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 ARL8BQ9NVJ2 186 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 TBCCD1Q9NVR7 557 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 PLEK2Q9NYT0 353 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 METRNQ9UJH8 293 aa13.76□□□□□ -0.21
SCLT1-204ENST00000503215 PURGQ9UJV8 347 aaKnown RBP13.76□□□□□ -0.21
SCLT1-204ENST00000503215 NDRG4Q9ULP0 352 aaKnown RBP13.76□□□□□ -0.21
SCLT1-204ENST00000503215 LOC105371242A0A075B767 164 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 OR6C6A6NF89 314 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 TCF21O43680 179 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 TIMM8AO60220 97 aaPredicted RBP13.75□□□□□ -0.21
SCLT1-204ENST00000503215 VENTXO95231 258 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 ADH4P08319 380 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 COX5BP10606 129 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 CDK5R2Q13319 367 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 MTX3Q5HYI7 312 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 LIPNQ5VXI9 398 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 UNQ6126/PRO20091Q6UXV3 157 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 DPY19L2P2Q6ZN68 376 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 PYURFQ96I23 114 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 OCEL1Q9H607 264 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 CD300AQ9UGN4 299 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
SCLT1-204ENST00000503215 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
SCLT1-204ENST00000503215 TRAV20A0A0B4J274 112 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 H3BSA7 217 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 TXNDC12O95881 172 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 CD55P08174 381 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 PCMT1P22061 227 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 CENPAP49450 140 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 TNFAIP6P98066 277 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-204ENST00000503215 SPIBQ01892 262 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 AQP6Q13520 282 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 HLXQ14774 488 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-204ENST00000503215 CORO6Q6QEF8 472 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 SMARCD3Q6STE5 483 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 OR2Z1Q8NG97 314 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 OR1F12Q8NHA8 337 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 RAB1CQ92928 201 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 TIMD4Q96H15 378 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 ERMAPQ96PL5 475 aaPredicted RBP13.74□□□□□ -0.21
SCLT1-204ENST00000503215 DCLRE1CQ96SD1 692 aaKnown RBP13.74□□□□□ -0.21
SCLT1-204ENST00000503215 CDRT15Q96T59 188 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 TMPRSS13Q9BYE2 586 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 EGLN1Q9GZT9 426 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 SRA1Q9HD15 236 aaKnown RBP13.74□□□□□ -0.21
SCLT1-204ENST00000503215 CYSLTR2Q9NS75 346 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 UBAP1Q9NZ09 502 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 LHFPL6Q9Y693 200 aa13.74□□□□□ -0.21
SCLT1-204ENST00000503215 IGLV1-36A0A0B4J1U3 117 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 ISPDA4D126 451 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 HSD17B1P14061 328 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 ADRA2CP18825 462 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 LIPAP38571 399 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 LSM6P62312 80 aaKnown RBP13.73□□□□□ -0.21
SCLT1-204ENST00000503215 KRT72Q14CN4 511 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 KCNMB1Q16558 191 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 RSPO1Q2MKA7 263 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-204ENST00000503215 RFX4Q33E94 735 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 ARL9Q6T311 187 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 CPLX4Q7Z7G2 160 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 C1orf174Q8IYL3 243 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 OR5AS1Q8N127 324 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 OR6V1Q8N148 313 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
SCLT1-204ENST00000503215 OR4K13Q8NH42 304 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 HAVCR1Q96D42 359 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 SAMD8Q96LT4 415 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 GAL3ST1Q99999 423 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 WACQ9BTA9 647 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 NDEL1Q9GZM8 345 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 ZDHHC8Q9ULC8 765 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 B9D1Q9UPM9 204 aa13.73□□□□□ -0.21
SCLT1-204ENST00000503215 ARPC2O15144 300 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 GMNNO75496 209 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 GADD45GO95257 159 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 PNPP00491 289 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 SBK2P0C263 348 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 HIST1H1CP16403 213 aaKnown RBP13.72□□□□□ -0.21
SCLT1-204ENST00000503215 GSTM3P21266 225 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 KITLGP21583 273 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 ZFP36P26651 326 aaKnown RBP13.72□□□□□ -0.21
SCLT1-204ENST00000503215 RPS6KA3P51812 740 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 PRSS12P56730 875 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 LCN2P80188 198 aa13.72□□□□□ -0.21
SCLT1-204ENST00000503215 SHQ1Q6PI26 577 aaKnown RBP13.72□□□□□ -0.21
SCLT1-204ENST00000503215 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms