RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CARD17Q5XLA6 110 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 SLC8B1Q6J4K2 584 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 ANKRD26P1Q6NSI1 321 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 NIPA1Q7RTP0 329 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 CTAGE6Q86UF2 777 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 MS4A15Q8N5U1 240 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 RAB3IL1Q8TBN0 382 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 ZNF502Q8TBZ5 544 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 SLC7A13Q8TCU3 470 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 RTN4IP1Q8WWV3 396 aaPredicted RBP1.79□□□□□ -2.12
CD46-218ENST00000496723 PKNOX2Q96KN3 472 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 ZNF717Q9BY31 904 aaPredicted RBP1.79□□□□□ -2.12
CD46-218ENST00000496723 FAM192AQ9GZU8 254 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 FGF20Q9NP95 211 aaPredicted RBP1.79□□□□□ -2.12
CD46-218ENST00000496723 LSM7Q9UK45 103 aaKnown RBP1.79□□□□□ -2.12
CD46-218ENST00000496723 CNTNAP1P78357 1384 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 AKNAQ7Z591 1439 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 COL5A1P20908 1838 aaPredicted RBP1.79□□□□□ -2.12
CD46-218ENST00000496723 SCN1AP35498 2009 aa1.79□□□□□ -2.12
CD46-218ENST00000496723 CAMTA1Q9Y6Y1 1673 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 IGKV3D-11A0A0A0MRZ8 115 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 ZNF816-ZNF321PA0A0X1KG74 233 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 SMCO2A6NFE2 343 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 AGTP01019 485 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 FTH1P02794 183 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 ANXA5P08758 320 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 ZNF250P15622 560 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 WARSP23381 471 aaKnown RBP1.78□□□□□ -2.12
CD46-218ENST00000496723 F2RP25116 425 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 SSTR5P35346 364 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 CDH6P55285 790 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 VSX2P58304 361 aaPredicted RBP1.78□□□□□ -2.12
CD46-218ENST00000496723 MXD1Q05195 221 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 IFT88Q13099 833 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 RCN1Q15293 331 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 ORMDL2Q53FV1 153 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 SASS6Q6UVJ0 657 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 CENPQQ7L2Z9 268 aaPredicted RBP1.78□□□□□ -2.12
CD46-218ENST00000496723 LRRC52Q8N7C0 313 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 FBXL13Q8NEE6 735 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 OR4C5Q8NGB2 326 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 LILRB4Q8NHJ6 448 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 ACMSDQ8TDX5 336 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 KIFAP3Q92845 792 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 SLC38A4Q969I6 547 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 DNAJC1Q96KC8 554 aaKnown RBP1.78□□□□□ -2.12
CD46-218ENST00000496723 TIMM17AQ99595 171 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 SLC29A1Q99808 456 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 FBXO6Q9NRD1 293 aaPredicted RBP1.78□□□□□ -2.12
CD46-218ENST00000496723 PITPNC1Q9UKF7 332 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 ST3GAL6Q9Y274 331 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 SIGLEC9Q9Y336 463 aa1.78□□□□□ -2.12
CD46-218ENST00000496723 TRBV11-1A0A0K0K1C0 115 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 GLYATL1P3A0A0U1RQE8 302 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 NDUFAB1O14561 156 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 KLHL41O60662 606 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 ERLIN1O75477 346 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 CLPXO76031 633 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 IGKV1D-16P01601 117 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 SERPINA5P05154 406 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 CD34P28906 385 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 SLC1A1P43005 524 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 C21orf59P57076 290 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 RGS8P57771 180 aaPredicted RBP1.77□□□□□ -2.13
CD46-218ENST00000496723 RAB10P61026 200 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 CDH17Q12864 832 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 SRSF5Q13243 272 aaKnown RBP1.77□□□□□ -2.13
CD46-218ENST00000496723 IDI1Q13907 227 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 IGFBP7Q16270 282 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 HSP90AB3PQ58FF7 597 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 PPM1LQ5SGD2 360 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 AP1ARQ63HQ0 302 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 METAP1DQ6UB28 335 aaPredicted RBP1.77□□□□□ -2.13
CD46-218ENST00000496723 UNQ9165/PRO28630Q6UXU0 137 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 LRP11Q86VZ4 500 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 MIR7-3HGQ8N6C7 128 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 METTL13Q8N6R0 699 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 OR4A4PQ8NGN8 299 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 FAM81AQ8TBF8 368 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 CIRBP-AS1Q8TBR5 109 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 PIFOQ8TCI5 191 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 ELMO1Q92556 727 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 NTAN1Q96AB6 310 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 ZNF488Q96MN9 340 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 CHP1Q99653 195 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 C20orf24Q9BUV8 137 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 RACGAP1Q9H0H5 632 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 NEK6Q9HC98 313 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 LGALS13Q9UHV8 139 aa1.77□□□□□ -2.13
CD46-218ENST00000496723 SHANK1Q9Y566 2161 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 LYRM9A8MSI8 78 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 LGALS9O00182 355 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 SIRPB1O00241 398 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 HMMRO75330 724 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 OR2J3O76001 311 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 KRT14P02533 472 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 CD74P04233 296 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 OR5H8P0DN80 308 aa1.76□□□□□ -2.13
CD46-218ENST00000496723 OTX1P32242 354 aaPredicted RBP1.76□□□□□ -2.13
CD46-218ENST00000496723 CEACAM3P40198 252 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms