RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 COMMD3Q9UBI1 195 aa14.45□□□□□ -0.1
HLA-A-208ENST00000496081 NOSIPQ9Y314 301 aaKnown RBP14.45□□□□□ -0.1
HLA-A-208ENST00000496081 FRYQ5TBA9 3013 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 ZNF878C9JN71 531 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 IGHG3P01860 377 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 SLC25A35Q3KQZ1 300 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 IDNKQ5T6J7 187 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.44□□□□□ -0.1
HLA-A-208ENST00000496081 SNX29P2Q8IUI4 249 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 TUSC5Q8IXB3 177 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 GPR137CQ8N3F9 429 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 CPT1CQ8TCG5 803 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 ALKBH3Q96Q83 286 aaPredicted RBP14.44□□□□□ -0.1
HLA-A-208ENST00000496081 ZCCHC4Q9H5U6 513 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 B3GAT2Q9NPZ5 323 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 FAM206AQ9NX38 181 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 OR52A1Q9UKL2 312 aa14.44□□□□□ -0.1
HLA-A-208ENST00000496081 URB1O60287 2271 aaKnown RBP14.43□□□□□ -0.1
HLA-A-208ENST00000496081 TRBV5-7A0A0A0MS05 114 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 MRPL33O75394 65 aaKnown RBP14.43□□□□□ -0.1
HLA-A-208ENST00000496081 THBS2P35442 1172 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 IFITM3Q01628 133 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 RIPPLY2Q5TAB7 128 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 FAM27BQ5VT28 67 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 KLHL24Q6TFL4 600 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 CHMP1BQ7LBR1 199 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 LRRC18Q8N456 261 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 ACOT12Q8WYK0 555 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 SLC25A18Q9H1K4 315 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 BCO1Q9HAY6 547 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 EMC3Q9P0I2 261 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 DAPK2Q9UIK4 370 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 AK6Q9Y3D8 172 aaKnown RBP14.43□□□□□ -0.1
HLA-A-208ENST00000496081 PCDHGA9Q9Y5G4 932 aaKnown RBP14.43□□□□□ -0.1
HLA-A-208ENST00000496081 V9GYH0 126 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 APC2O95996 2303 aa14.43□□□□□ -0.1
HLA-A-208ENST00000496081 NOTOA8MTQ0 251 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 WISP2O76076 250 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 RAF1P04049 648 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 SLC2A2P11168 524 aaPredicted RBP14.42□□□□□ -0.1
HLA-A-208ENST00000496081 PPP3R1P63098 170 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 HIST1H3AP68431 136 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 HIST2H3PS2Q5TEC6 136 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 MZT2AQ6P582 158 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 HIST2H3AQ71DI3 136 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 TMEM106AQ96A25 262 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 KCTD12Q96CX2 325 aaKnown RBP14.42□□□□□ -0.1
HLA-A-208ENST00000496081 GFI1Q99684 422 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 RNF122Q9H9V4 155 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 BRD7Q9NPI1 651 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 CLEC4AQ9UMR7 237 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 CAMK2AQ9UQM7 478 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 ANKRD61A6NGH8 418 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 ZNF724A8MTY0 619 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 DOK2O60496 412 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 HPGDSO60760 199 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 ISG15P05161 165 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 EPXP11678 715 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 NPR2P20594 1047 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 ZNF169Q14929 603 aaPredicted RBP14.42□□□□□ -0.1
HLA-A-208ENST00000496081 RNPS1Q15287 305 aaKnown RBP14.42□□□□□ -0.1
HLA-A-208ENST00000496081 CEACAM16Q2WEN9 425 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 TSPO2Q5TGU0 170 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 ZNF704Q6ZNC4 412 aaPredicted RBP14.42□□□□□ -0.1
HLA-A-208ENST00000496081 GJC3Q8NFK1 279 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 TSEN15Q8WW01 171 aaKnown RBP14.42□□□□□ -0.1
HLA-A-208ENST00000496081 SLCO5A1Q9H2Y9 848 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 NIPAL2Q9H841 368 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 CALHM2Q9HA72 323 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 GPR35Q9HC97 309 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 TMEM38BQ9NVV0 291 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 PARPBPQ9NWS1 579 aa14.42□□□□□ -0.1
HLA-A-208ENST00000496081 CEP295Q9C0D2 2601 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 A0A1B0GVG6 124 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 PDGFAP04085 211 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 YES1P07947 543 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 HSD11B1P28845 292 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 TAF13Q15543 124 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 BCL2L15Q5TBC7 163 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 STAC2Q6ZMT1 411 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 SPACA3Q8IXA5 215 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 THRSPQ92748 146 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 FBXO17Q96EF6 278 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 DIRAS2Q96HU8 199 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 FOXB1Q99853 325 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 TCF7L1Q9HCS4 588 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 DDX28Q9NUL7 540 aaKnown RBP14.41□□□□□ -0.1
HLA-A-208ENST00000496081 LAMA5O15230 3695 aa14.41□□□□□ -0.1
HLA-A-208ENST00000496081 TRAV8-7A0A075B6U6 113 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 ARPC4-TTLL3A0A0A6YYG9 625 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 A0A1B0GVC2 190 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 PDCD5O14737 125 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 TGM6O95932 706 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 IGHV3-9P01782 118 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 TTRP02766 147 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 ATF1P18846 271 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 PRKXP51817 358 aa14.4□□□□□ -0.1
HLA-A-208ENST00000496081 PSMA6P60900 246 aaKnown RBP14.4□□□□□ -0.1
HLA-A-208ENST00000496081 CCDC92Q53HC0 331 aaPredicted RBP14.4□□□□□ -0.1
HLA-A-208ENST00000496081 LRRTM1Q86UE6 522 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms