RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CBR4Q8N4T8 237 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 ZFP41Q8N8Y5 198 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 C8orf31Q8N9H6 132 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 CHST4Q8NCG5 386 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 APH1BQ8WW43 257 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 NTAN1Q96AB6 310 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 TM4SF18Q96CE8 201 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 C9orf72Q96LT7 481 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 FOXC2Q99958 501 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 PXMP2Q9NR77 195 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 TBX21Q9UL17 535 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 CAMTA1Q9Y6Y1 1673 aa3.49□□□□□ -1.85
SSR3-208ENST00000496050 IGLV1-36A0A0B4J1U3 117 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 A0A1W2PRD5 423 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 TMEM120BA0PK00 339 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 OR6C74A6NCV1 312 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 L7N2F9 121 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 SLC9A3R1O14745 358 aaPredicted RBP3.48□□□□□ -1.85
SSR3-208ENST00000496050 AKR7A2O43488 359 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 RDH16O75452 317 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 FCN3O75636 299 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 AQP8O94778 261 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 IFNW1P05000 195 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 U2AF2P26368 475 aaKnown RBP eCLIP3.48□□□□□ -1.852e-11■■□□□ 12.7
SSR3-208ENST00000496050 CDH17Q12864 832 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 WDR43Q15061 677 aaKnown RBP eCLIP3.48□□□□□ -1.85
SSR3-208ENST00000496050 KLHL40Q2TBA0 621 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 CHRFAM7AQ494W8 412 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 TTC19Q6DKK2 380 aaPredicted RBP3.48□□□□□ -1.85
SSR3-208ENST00000496050 PLET1Q6UQ28 207 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 MBOAT2Q6ZWT7 520 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 ABHD12BQ7Z5M8 362 aaPredicted RBP3.48□□□□□ -1.85
SSR3-208ENST00000496050 NPWQ8N729 165 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 OR52E2Q8NGJ4 325 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 ABHD3Q8WU67 409 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 ZNF681Q96N22 645 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 LINC00167Q96N53 147 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 OR2A5Q96R48 311 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 CHAC1Q9BUX1 264 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 TMEM38AQ9H6F2 299 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 RPRD1BQ9NQG5 326 aaKnown RBP3.48□□□□□ -1.85
SSR3-208ENST00000496050 MYEF2Q9P2K5 600 aaKnown RBP3.48□□□□□ -1.85
SSR3-208ENST00000496050 KLK12Q9UKR0 248 aa3.48□□□□□ -1.85
SSR3-208ENST00000496050 PRRC2AP48634 2157 aaKnown RBP3.48□□□□□ -1.85
SSR3-208ENST00000496050 IGLV1-50A0A075B6I6 118 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 GOLGA6L7A0A1B0GV03 622 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 A0A1W2PP18 115 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 H0YC42 278 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 BCKDKO14874 412 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 SNAI2O43623 268 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 MED6O75586 246 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 BCHEP06276 602 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 EIF4EP06730 217 aaKnown RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 HOXC4P09017 264 aaPredicted RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 POLR2MP0CAP2 368 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 ERGP11308 486 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 P2RX1P51575 399 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 CLDN8P56748 225 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 RAP1AP62834 184 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 MADCAM1Q13477 382 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 DOC2AQ14183 400 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 PON2Q15165 354 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 C12orf54Q6X4T0 127 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 FBXW12Q6X9E4 464 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 NCCRP1Q6ZVX7 275 aaPredicted RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 APRG1Q8IVJ8 170 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 METTL13Q8N6R0 699 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 FAM86B1Q8N7N1 296 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 SNX31Q8N9S9 440 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 OR56A4Q8NGH8 313 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 OR6Q1Q8NGQ2 317 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 OR52E5Q8NH55 327 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 GPX8Q8TED1 209 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 MRGPRFQ96AM1 343 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 ISG20Q96AZ6 181 aaKnown RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 FOPNLQ96NB1 174 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 SLC7A5P2Q9GIP4 190 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 BLZF1Q9H2G9 400 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 VCXQ9H320 206 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 RPP21Q9H633 154 aaKnown RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 SYNDIG1Q9H7V2 258 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 ZC4H2Q9NQZ6 224 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 CLN6Q9NWW5 311 aa3.47□□□□□ -1.85
SSR3-208ENST00000496050 PEF1Q9UBV8 284 aaKnown RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 RCL1Q9Y2P8 373 aaKnown RBP3.47□□□□□ -1.85
SSR3-208ENST00000496050 ARHGAP21Q5T5U3 1957 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 A6NDN8 102 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 TCN2P20062 427 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 HCAR3P49019 387 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 RAB11AP62491 216 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 IRF8Q02556 426 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 ART3Q13508 389 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 RCAN2Q14206 197 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 RAB11BQ15907 218 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 TRMT5Q32P41 509 aaKnown RBP3.46□□□□□ -1.86
SSR3-208ENST00000496050 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 OR5W2Q8NH69 310 aa3.46□□□□□ -1.86
SSR3-208ENST00000496050 FAM104AQ969W3 186 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms