RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 RAB27BO00194 218 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 LMX1BO60663 402 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 FOLR2P14207 255 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 GJA4P35212 333 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 ARRB1P49407 418 aaPredicted RBP13.78□□□□□ -0.2
SDF4-207ENST00000494748 CXADRP78310 365 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 C1orf100Q5SVJ3 147 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 ELP5Q8TE02 316 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 TMED6Q8WW62 240 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 FOXRED1Q96CU9 486 aaPredicted RBP13.78□□□□□ -0.2
SDF4-207ENST00000494748 NRIP2Q9BQI9 281 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 DHCR7Q9UBM7 475 aaKnown RBP13.78□□□□□ -0.2
SDF4-207ENST00000494748 DHDHQ9UQ10 334 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 FAM96BQ9Y3D0 163 aa13.78□□□□□ -0.2
SDF4-207ENST00000494748 LOC100509620A0A075B734 347 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 MSGN1A6NI15 193 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 FAM25EA8MYX2 175 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 TPT1P13693 172 aaKnown RBP13.77□□□□□ -0.2
SDF4-207ENST00000494748 FCARP24071 287 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 PSMB6P28072 239 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 PTGFRP43088 359 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 NR0B1P51843 470 aaKnown RBP13.77□□□□□ -0.2
SDF4-207ENST00000494748 IL13RA1P78552 427 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 IGLV3-21P80748 117 aaPredicted RBP13.77□□□□□ -0.2
SDF4-207ENST00000494748 PDZK1IP1Q13113 114 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 MEF2DQ14814 521 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 GFOD2Q3B7J2 385 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 CMBLQ96DG6 245 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 PHB2Q99623 299 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 PRRT1Q99946 306 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 CFHR5Q9BXR6 569 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 Q9N2J8 555 aa13.77□□□□□ -0.2
SDF4-207ENST00000494748 URB1O60287 2271 aaKnown RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 NUDT19A8MXV4 375 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 FAM157AC9JC47 383 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 H0Y8X5 98 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 PLGP00747 810 aaPredicted RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 MUC1P15941 1255 aaPredicted RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 FAHD2BQ6P2I3 314 aaPredicted RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 DRAM2Q6UX65 266 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 PARGQ86W56 976 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 RNF141Q8WVD5 230 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 PTX4Q96A99 478 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 FAHD2AQ96GK7 314 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 SLC22A11Q9NSA0 550 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 GDF2Q9UK05 429 aaPredicted RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 CACNA1IQ9P0X4 2223 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 EEF1E1-BLOC1S5C9J1V9 151 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 PRAMEF26H0Y7S4 382 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 SLC31A1O15431 190 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 DUS4LO95620 317 aaKnown RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 RENP00797 406 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 ERCC1P07992 297 aaPredicted RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 SLC6A9P48067 706 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 PJVKQ0ZLH3 352 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 NKAPLQ5M9Q1 402 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 ZNF584Q8IVC4 421 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 LINC00469Q8N7U9 141 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 ZNF615Q8N8J6 731 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 ACBD4Q8NC06 268 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 OR14C36Q8NHC7 312 aa13.77□□□□□ -0.21
SDF4-207ENST00000494748 TSACCQ96A04 125 aaPredicted RBP13.77□□□□□ -0.21
SDF4-207ENST00000494748 IGLV1-36A0A0B4J1U3 117 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 DCDC2BA2VCK2 349 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 LYL1P12980 280 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 ECH1Q13011 328 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 IL34Q6ZMJ4 242 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 SFTPA2Q8IWL1 248 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 C12orf76Q8N812 135 aaPredicted RBP13.76□□□□□ -0.21
SDF4-207ENST00000494748 CMKLR1Q99788 373 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 CHMP1AQ9HD42 196 aaPredicted RBP13.76□□□□□ -0.21
SDF4-207ENST00000494748 A0A0B4J2A0 478 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 STK17BO94768 372 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 APBB3O95704 486 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 SERPINF1P36955 418 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 QRFPP83859 136 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 HGFACQ04756 655 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 UNC119Q13432 240 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 CDNFQ49AH0 187 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 FAM109BQ6ICB4 259 aaPredicted RBP13.76□□□□□ -0.21
SDF4-207ENST00000494748 MISPQ8IVT2 679 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 SKA3Q8IX90 412 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 ZNF440Q8IYI8 595 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 PATE1Q8WXA2 126 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 ZNF587Q96SQ5 575 aaPredicted RBP13.76□□□□□ -0.21
SDF4-207ENST00000494748 RTN4RQ9BZR6 473 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 NMES1Q9C002 83 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 FAM60AQ9NP50 221 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 SHPKQ9UHJ6 478 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 GNRH1P01148 92 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 BGLAPP02818 100 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 GDI1P31150 447 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 POLR2GP62487 172 aaKnown RBP eCLIP13.76□□□□□ -0.21
SDF4-207ENST00000494748 SKP1P63208 163 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
SDF4-207ENST00000494748 NUP54Q7Z3B4 507 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 ZNF519Q8TB69 540 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 DCUN1D4Q92564 292 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms