RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 FFAR1O14842 300 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 STAMBPO95630 424 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 SERPINA1P01009 418 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 SAGP10523 405 aaPredicted RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 CCL2P13500 99 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 DAOP14920 347 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 NCK1P16333 377 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 TCN1P20061 433 aaPredicted RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 EVX1P49640 407 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 GSK3BP49841 420 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 NUDT2P50583 147 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 TRAM2Q15035 370 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 SLC36A2Q495M3 483 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 IQCCQ4KMZ1 466 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 IFI44LQ53G44 452 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 ARMC4Q5T2S8 1044 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 C6orf52Q5T4I8 152 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 C8orf82Q6P1X6 216 aaPredicted RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 TMEM53Q6P2H8 277 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 TBPL2Q6SJ96 375 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 RRM2BQ7LG56 351 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 SLC16A14Q7RTX9 510 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 HDDC2Q7Z4H3 204 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 MEX3DQ86XN8 651 aaKnown RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 HIPK1Q86Z02 1210 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 ZNF584Q8IVC4 421 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 NRMQ8IXM6 262 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 ZNF540Q8NDQ6 660 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 NOXO1Q8NFA2 376 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 OR51A7Q8NH64 312 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 NEU4Q8WWR8 484 aaPredicted RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 NSMAFQ92636 917 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 HDAC2Q92769 488 aaKnown RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 FAM162AQ96A26 154 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 MRPL24Q96A35 216 aaKnown RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 CMTM5Q96DZ9 223 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 FAM107BQ9H098 131 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 KCNN2Q9H2S1 579 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 TXNIPQ9H3M7 391 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 TPK1Q9H3S4 243 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 UNKLQ9H9P5 680 aaKnown RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 MYOZ1Q9NP98 299 aaPredicted RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 ETAA1Q9NY74 926 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 STX18Q9P2W9 335 aaKnown RBP6.93□□□□□ -1.3
RIF1-211ENST00000494333 FBXL3Q9UKT7 428 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 FZR1Q9UM11 496 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 PLCE1Q9P212 2302 aa6.93□□□□□ -1.3
RIF1-211ENST00000494333 NIPBLQ6KC79 2804 aaeCLIP6.92□□□□□ -1.3
RIF1-211ENST00000494333 A0A087WUU8 490 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 IGKV1D-43A0A0B4J1Z2 117 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 IGHV4-61A0A0C4DH41 118 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 IQCMA0A1B0GVH7 501 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 EFCAB9A8MZ26 197 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 LYNX1G3V0Z9 82 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 M0R233 179 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 SYNGR3O43761 229 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 MGRN1O60291 552 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 SLC2A10O95528 541 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 PTHP01270 115 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 IGFBP1P08833 259 aaPredicted RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 IGHV4-31P0DP07 118 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 LYNX1P0DP58 116 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 APEHP13798 732 aaKnown RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 CDAP32320 146 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 ALDH3B1P43353 468 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 PSME3P61289 254 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 RPS23P62266 143 aaKnown RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 PRKCDQ05655 676 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 FMODQ06828 376 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 CD47Q08722 323 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 GALEQ14376 348 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 CNN3Q15417 329 aaKnown RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 SGCAQ16586 387 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 CHRFAM7AQ494W8 412 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 C10orf128Q5T292 105 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 GLYATQ6IB77 296 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 RGS7BPQ6MZT1 257 aaPredicted RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 HACD2Q6Y1H2 254 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 ZNF730Q6ZMV8 503 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 CPLX4Q7Z7G2 160 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 DPPA2Q7Z7J5 298 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 OAFQ86UD1 273 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 IGFN1Q86VF2 1251 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 LRP11Q86VZ4 500 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 RNF113BQ8IZP6 322 aaKnown RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 OFCC1Q8IZS5 231 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 ZNF786Q8N393 782 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 FAM156AQ8NDB6 213 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 RBM15BQ8NDT2 890 aaKnown RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 SLC30A7Q8NEW0 376 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 GEMIN6Q8WXD5 167 aaKnown RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 RBP7Q96R05 134 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 SEPHS2Q99611 448 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 KCTD14Q9BQ13 255 aaPredicted RBP6.92□□□□□ -1.3
RIF1-211ENST00000494333 BPESC1Q9GZL8 116 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 MYLK2Q9H1R3 596 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 OR51B6Q9H340 312 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 SIAEQ9HAT2 523 aa6.92□□□□□ -1.3
RIF1-211ENST00000494333 SMURF2Q9HAU4 748 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms