RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RIN1Q13671 783 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 GGTLC2Q14390 218 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 MEP1BQ16820 701 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 PCGF3Q3KNV8 242 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 ALKBH6Q3KRA9 238 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 SPATA24Q86W54 205 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 GJC3Q8NFK1 279 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 OR1F12Q8NHA8 337 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 KLF14Q8TD94 323 aaPredicted RBP19.34■□□□□ 0.69
SNIP1-203ENST00000493916 GIPC3Q8TF64 312 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 IPCEF1Q8WWN9 437 aaPredicted RBP19.34■□□□□ 0.69
SNIP1-203ENST00000493916 DDOQ99489 341 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 CADM1Q9BY67 442 aaKnown RBP19.34■□□□□ 0.69
SNIP1-203ENST00000493916 OR2J1Q9GZK6 312 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 FN3KQ9H479 309 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 TUBG2Q9NRH3 451 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 NKIRAS2Q9NYR9 191 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 NAV3Q8IVL0 2385 aa19.34■□□□□ 0.69
SNIP1-203ENST00000493916 IGHV4-61A0A0C4DH41 118 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 RER1O15258 196 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 GSC2O15499 205 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 NCR1O76036 304 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 TFP02787 698 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 HPXP02790 462 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 MT-ND5P03915 603 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 MPV17P39210 176 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 TEKQ02763 1124 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 SLC36A3Q495N2 470 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 TMEM255AQ5JRV8 349 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 ZNF362Q5T0B9 420 aaPredicted RBP19.33■□□□□ 0.68
SNIP1-203ENST00000493916 TMEM154Q6P9G4 183 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 OR2T33Q8NG76 320 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 RDH5Q92781 318 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 DCLRE1CQ96SD1 692 aaKnown RBP19.33■□□□□ 0.68
SNIP1-203ENST00000493916 NIPSNAP1Q9BPW8 284 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 TSSK6Q9BXA6 273 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 HDHD2Q9H0R4 259 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 YY1AP1Q9H869 796 aa19.33■□□□□ 0.68
SNIP1-203ENST00000493916 ANK3Q12955 4377 aaKnown RBP19.33■□□□□ 0.68
SNIP1-203ENST00000493916 ATP5HO75947 161 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 SOX14O95416 240 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 IGHV4-31P0DP07 118 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 ZNF23P17027 643 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 RASSF2P50749 326 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.32■□□□□ 0.68
SNIP1-203ENST00000493916 SLC37A3Q8NCC5 494 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 PAPD5Q8NDF8 572 aaKnown RBP19.32■□□□□ 0.68
SNIP1-203ENST00000493916 OR4Q3Q8NH05 313 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 FEVQ99581 238 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 COQ7Q99807 217 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 CHODLQ9H9P2 273 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 ARMC1Q9NVT9 282 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 CGGBP1Q9UFW8 167 aaPredicted RBP19.32■□□□□ 0.68
SNIP1-203ENST00000493916 KCNG2Q9UJ96 466 aa19.32■□□□□ 0.68
SNIP1-203ENST00000493916 CHD3Q12873 2000 aaKnown RBP19.32■□□□□ 0.68
SNIP1-203ENST00000493916 LYNX1G3V0Z9 82 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 J3QW42 95 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 GNGT2O14610 69 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 FKBP6O75344 327 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 TACSTD2P09758 323 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 LYNX1P0DP58 116 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 ACHEP22303 614 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 MAGEB1P43366 347 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 MMP15P51511 669 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 DBPQ10586 325 aaPredicted RBP19.31■□□□□ 0.68
SNIP1-203ENST00000493916 C6orf52Q5T4I8 152 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 SLC18B1Q6NT16 456 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 TMEM179BQ7Z7N9 219 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 CYB561A3Q8NBI2 242 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 OR2T4Q8NH00 348 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 SLC7A6Q92536 515 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 COG8Q96MW5 612 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 CYSLTR2Q9NS75 346 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 KLHL21Q9UJP4 597 aa19.31■□□□□ 0.68
SNIP1-203ENST00000493916 GGT2P36268 569 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 LIPAP38571 399 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 RGS6P49758 472 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 GZMKP49863 264 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 ZNF81P51508 661 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 CBX1P83916 185 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 CYB5R2Q6BCY4 276 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 CORO6Q6QEF8 472 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 PROKR2Q8NFJ6 384 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 GTF3AQ92664 365 aaKnown RBP19.3■□□□□ 0.68
SNIP1-203ENST00000493916 RBM4Q9BWF3 364 aaKnown RBP19.3■□□□□ 0.68
SNIP1-203ENST00000493916 YAE1D1Q9NRH1 226 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 MRPL22Q9NWU5 206 aaKnown RBP19.3■□□□□ 0.68
SNIP1-203ENST00000493916 CYB5R1Q9UHQ9 305 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 GRIP1Q9Y3R0 1128 aa19.3■□□□□ 0.68
SNIP1-203ENST00000493916 RTTNQ86VV8 2226 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 PLSCR5A0PG75 271 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 HLA-DQA2P01906 255 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 PYCR1P32322 319 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 CHN2P52757 468 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 SLC25A1P53007 311 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 CCL8P80075 99 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 KRTAP27-1Q3LI81 207 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 FAM209AQ5JX71 171 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 CFAP77Q6ZQR2 320 aa19.29■□□□□ 0.68
SNIP1-203ENST00000493916 TEX47Q8TBZ9 253 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms