RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TTC29Q8NA56 475 aaPredicted RBP2.4□□□□□ -2.03
CLK1-213ENST00000492793 NOXO1Q8NFA2 376 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 OR4C5Q8NGB2 326 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 NUBPLQ8TB37 319 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 OR51E1Q8TCB6 317 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 APH1BQ8WW43 257 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 ZNF681Q96N22 645 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 TIMM17AQ99595 171 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 C11orf70Q9BRQ4 267 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 RPP21Q9H633 154 aaKnown RBP2.4□□□□□ -2.03
CLK1-213ENST00000492793 GEMIN7Q9H840 131 aaKnown RBP2.4□□□□□ -2.03
CLK1-213ENST00000492793 ZNF355PQ9NSJ1 428 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 TMEM14AQ9Y6G1 99 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 KCNE3Q9Y6H6 103 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 AKNAQ7Z591 1439 aa2.4□□□□□ -2.03
CLK1-213ENST00000492793 GPATCH8Q9UKJ3 1502 aaKnown RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 IGLV1-50A0A075B6I6 118 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 WRBO00258 174 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 RBFOX2O43251 390 aaKnown RBP eCLIP2.39□□□□□ -2.03
CLK1-213ENST00000492793 ERCC1P07992 297 aaPredicted RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 RAB3AP20336 220 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 U2AF2P26368 475 aaKnown RBP eCLIP2.39□□□□□ -2.038e-9■■■□□ 17.9
CLK1-213ENST00000492793 SSTR5P35346 364 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 MRPL19P49406 292 aaKnown RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 PPP1CBP62140 327 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 ESRRGP62508 458 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 CCNA1P78396 465 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 SYCNQ0VAF6 134 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 IFT88Q13099 833 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 IDI1Q13907 227 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 ZNF726P1Q15940 193 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 KHDRBS2Q5VWX1 349 aaKnown RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 Q6ZR03 302 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 BZW1Q7L1Q6 419 aaKnown RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 SSX9Q7RTT3 188 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 SNX20Q7Z614 316 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 GABRG1Q8N1C3 465 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 CHST4Q8NCG5 386 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 PIFOQ8TCI5 191 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 TGS1Q96RS0 853 aaKnown RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 ANP32EQ9BTT0 268 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 ACTR3CQ9C0K3 210 aaPredicted RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 SAV1Q9H4B6 383 aaPredicted RBP2.39□□□□□ -2.03
CLK1-213ENST00000492793 WFDC1Q9HC57 220 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 SLC17A4Q9Y2C5 497 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 HYOU1Q9Y4L1 999 aa2.39□□□□□ -2.03
CLK1-213ENST00000492793 TRAV19A0A0A6YYK7 116 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 TMEM223A0PJW6 202 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 TMEM150BA6NC51 233 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 SYCE1LA8MT33 242 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 H7C0C1 242 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 DNALI1O14645 258 aaPredicted RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 NVLO15381 856 aaKnown RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 RAD51CO43502 376 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 CHST1O43916 411 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 FLOT1O75955 427 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 LSM8O95777 96 aaKnown RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 SERPINE2P07093 398 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 ZNF806P0C7X5 589 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 ERGP11308 486 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 OR1E1P30953 314 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 ATP5OP48047 213 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 ABCA11PQ4W5N1 156 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 ZNF684Q5T5D7 378 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 TPTE2P1Q5T6R2 138 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 UBE2UQ5VVX9 321 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 H1FOOQ8IZA3 346 aaPredicted RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 BBOF1Q8ND07 529 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 OR52E2Q8NGJ4 325 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 OR5K2Q8NHB8 316 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 LINC00477Q96M19 166 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 XPO6Q96QU8 1125 aaKnown RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 CAMK2N2Q96S95 79 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 BPIFA3Q9BQP9 254 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 UBE2ZQ9H832 354 aaPredicted RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 MRM3Q9HC36 420 aaKnown RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 SIRT7Q9NRC8 400 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 C20orf96Q9NUD7 363 aaPredicted RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 DDX19AQ9NUU7 478 aaKnown RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 ZNF282Q9UDV7 671 aaPredicted RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 KIF26AQ9ULI4 1882 aaPredicted RBP2.38□□□□□ -2.03
CLK1-213ENST00000492793 ZNF835Q9Y2P0 537 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 IGSF9BQ9UPX0 1349 aa2.38□□□□□ -2.03
CLK1-213ENST00000492793 NSD2O96028 1365 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 IGLV1-36A0A0B4J1U3 117 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 TRBV9A0A0B4J1U6 114 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 C7orf66A4D0T2 115 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 SLC9A3R1O14745 358 aaPredicted RBP2.37□□□□□ -2.03
CLK1-213ENST00000492793 SCAMP2O15127 329 aaKnown RBP2.37□□□□□ -2.03
CLK1-213ENST00000492793 BET1O15155 118 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 RP2O75695 350 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 OR2F2O95006 317 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 WISP3O95389 354 aaPredicted RBP2.37□□□□□ -2.03
CLK1-213ENST00000492793 CT45A6P0DMU7 189 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 CT45A5P0DMU8 189 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 CT45A7P0DMV0 189 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 IL32P24001 234 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 STOMP27105 288 aa2.37□□□□□ -2.03
CLK1-213ENST00000492793 SLC1A2P43004 574 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms