RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 OR10G2Q8NGC3 310 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 GLYATL2Q8WU03 294 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 PEX13Q92968 403 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 EEF1AKMT3Q96AZ1 226 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 EXOSC8Q96B26 276 aaKnown RBP1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 GALNT14Q96FL9 552 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 DNAJC1Q96KC8 554 aaKnown RBP1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 BMFQ96LC9 184 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 SLC25A2Q9BXI2 301 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 SLC7A5P2Q9GIP4 190 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 PARP12Q9H0J9 701 aaKnown RBP1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 TMEM38AQ9H6F2 299 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 PATZ1Q9HBE1 687 aaKnown RBP1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 BEX1Q9HBH7 125 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 ISYNA1Q9NPH2 558 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 MRPL22Q9NWU5 206 aaKnown RBP1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 UVRAGQ9P2Y5 699 aa1.7□□□□□ -2.14
HMGB1P30-201ENST00000492455 IGHV5-51A0A0C4DH38 117 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 A0A1B0GTQ1 180 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 NCBP2LA6PVI3 153 aaKnown RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 M0R3G1 203 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 FCN3O75636 299 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 RP2O75695 350 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 GABARAPO95166 117 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 CD160O95971 181 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 HLA-HP01893 362 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 HBE1P02100 147 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 PRPS2P11908 318 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 CTRB1P17538 263 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 CEACAM3P40198 252 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 CEACAM6P40199 344 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 MAGEA1P43355 309 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 RPS9P46781 194 aaKnown RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 HERVK_113P61574 105 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 GINS1Q14691 196 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 NCF4Q15080 339 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 PON2Q15165 354 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 THEM4Q5T1C6 240 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 GPR107Q5VW38 600 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 STUMQ69YW2 141 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 DNAJC24Q6P3W2 148 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 CEMP1Q6PRD7 247 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 OTUD6AQ7L8S5 288 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 MICU2Q8IYU8 434 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 NOXO1Q8NFA2 376 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 OR56A4Q8NGH8 313 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 APH1BQ8WW43 257 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 TMEM230Q96A57 120 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 MRGPRFQ96AM1 343 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 ISG20Q96AZ6 181 aaKnown RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 ZNF681Q96N22 645 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 ZYG11BQ9C0D3 744 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 VCXQ9H320 206 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 SAV1Q9H4B6 383 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 RPP21Q9H633 154 aaKnown RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 ACP6Q9NPH0 428 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 TMEM9BQ9NQ34 198 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 AGPAT4Q9NRZ5 378 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 CLN6Q9NWW5 311 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 MYEF2Q9P2K5 600 aaKnown RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 OR12D3Q9UGF7 316 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 RCL1Q9Y2P8 373 aaKnown RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 PCM1Q15154 2024 aa1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 COL22A1Q8NFW1 1626 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P30-201ENST00000492455 ASTN1O14525 1302 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 UBN2Q6ZU65 1347 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 IGKV6-21A0A0C4DH24 114 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 A6NDN8 102 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 H7C0C1 242 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 SLC9A3R1O14745 358 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 AKR7A2O43488 359 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 WISP3O95389 354 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 IGKV3-11P04433 115 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 HLA-DPB1P04440 258 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 IFNW1P05000 195 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 CLTAP09496 248 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 UBCP0CG48 685 aaKnown RBP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 RALBP11234 206 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 ATF6P18850 670 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 CSNK2A2P19784 350 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 RAB4AP20338 218 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 U2AF2P26368 475 aaKnown RBP eCLIP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 NBL1P41271 181 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 TNFSF9P41273 254 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 SLC1A2P43004 574 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 UBE2MP61081 183 aaKnown RBP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 RAD51Q06609 339 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 ERCC8Q13216 396 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 SLAQ13239 276 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 EIF4EBP1Q13541 118 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 QPRTQ15274 297 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 RGNQ15493 299 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 BEX5Q5H9J7 111 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 PIP5KL1Q5T9C9 394 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 PLCXD3Q63HM9 321 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 ARL9Q6T311 187 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 PLET1Q6UQ28 207 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 NPSR1Q6W5P4 371 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 MBOAT2Q6ZWT7 520 aa1.68□□□□□ -2.14
HMGB1P30-201ENST00000492455 APRG1Q8IVJ8 170 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms