RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
VPS26A-205ENST00000489656 WNT11O96014 354 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 CGAP01215 116 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 IL2RAP01589 272 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 TMIGD3P0DMS9 266 aaPredicted RBP12.42□□□□□ -0.42
VPS26A-205ENST00000489656 GLI4P10075 376 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 B4GALT1P15291 398 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 CTSSP25774 331 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 CRYBB2P43320 205 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 PER3P56645 1201 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 PCBD1P61457 104 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 SCRN3Q0VDG4 424 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 FAPQ12884 760 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 LY6DQ14210 128 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 ZNF813Q6ZN06 617 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 Q6ZT83 130 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 UBE2J2Q8N2K1 259 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 ZFP41Q8N8Y5 198 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 CNEP1R1Q8N9A8 125 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 ST6GALNAC3Q8NDV1 305 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 HTRA1Q92743 480 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 FBXO17Q96EF6 278 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 PGLYRP3Q96LB9 341 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 REPIN1Q9BWE0 567 aaKnown RBP12.42□□□□□ -0.42
VPS26A-205ENST00000489656 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 GRIP1Q9Y3R0 1128 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
VPS26A-205ENST00000489656 POLEQ07864 2286 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 TRDV1A0A1B0GX56 115 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 SLC22A1O15245 554 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 GPX5O75715 221 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 IL18BPO95998 194 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 ITGA5P08648 1049 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 MMP7P09237 267 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 H2BFMP0C1H6 154 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 CD8BP10966 210 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 COX5AP20674 150 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 FGF9P31371 208 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 PSMB10P40306 273 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 CCR9P51686 369 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 FOXG1P55316 489 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 NANOS3P60323 173 aaKnown RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 RPS25P62851 125 aaKnown RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 GRB2P62993 217 aaKnown RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 FOXF2Q12947 444 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 ALKBH1Q13686 389 aaKnown RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 CNPY1Q3B7I2 92 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 CCDC92Q53HC0 331 aaPredicted RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 ZNF544Q6NX49 715 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 ARL9Q6T311 187 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 KLHL24Q6TFL4 600 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 DPPA2Q7Z7J5 298 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 ALDH16A1Q8IZ83 802 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 LRRC18Q8N456 261 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 MS4A15Q8N5U1 240 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 OR2G2Q8NGZ5 317 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 RPL3LQ92901 407 aaKnown RBP12.41□□□□□ -0.42
VPS26A-205ENST00000489656 STARD4Q96DR4 205 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 SFXN3Q9BWM7 321 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 KCNN2Q9H2S1 579 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 R4GMQ9 66 aa12.41□□□□□ -0.42
VPS26A-205ENST00000489656 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 PNMA8CA0A1B0GUJ8 204 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 RER1O15258 196 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 RPP14O95059 124 aaKnown RBP12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ZNF32P17041 273 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 OTX1P32242 354 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-205ENST00000489656 MMP16P51512 607 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ECH1Q13011 328 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 RAB35Q15286 201 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ZNF829Q3KNS6 432 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ELFN2Q5R3F8 820 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 SLC16A14Q7RTX9 510 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 CATSPERDQ86XM0 798 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-205ENST00000489656 SKA3Q8IX90 412 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 RPRMLQ8N4K4 120 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 NAXEQ8NCW5 288 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 C1orf162Q8NEQ5 155 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-205ENST00000489656 BCL2L2Q92843 193 aaPredicted RBP12.4□□□□□ -0.42
VPS26A-205ENST00000489656 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 SH3GL3Q99963 347 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 HDHD2Q9H0R4 259 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ZNF224Q9NZL3 707 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 FRRS1LQ9P0K9 344 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 ATPIF1Q9UII2 106 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 SSR3Q9UNL2 185 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 PROCRQ9UNN8 238 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 TIMM10BQ9Y5J6 103 aa12.4□□□□□ -0.42
VPS26A-205ENST00000489656 COL6A6A6NMZ7 2263 aa12.39□□□□□ -0.43
VPS26A-205ENST00000489656 ARPC4-TTLL3A0A0A6YYG9 625 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms