RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 FMODQ06828 376 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 FOXO1Q12778 655 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 TRAM1Q15629 374 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 TMEM95Q3KNT9 176 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 HES5Q5TA89 166 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 RAET1LQ5VY80 246 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 RPL22L1Q6P5R6 122 aaKnown RBP10.82□□□□□ -0.68
HDAC6-230ENST00000488543 TMPPEQ6ZT21 453 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 DPY19L4Q7Z388 723 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 YRDCQ86U90 279 aaKnown RBP10.82□□□□□ -0.68
HDAC6-230ENST00000488543 SULF2Q8IWU5 870 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 OR8H1Q8NGG4 311 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 MRPL48Q96GC5 212 aaKnown RBP10.82□□□□□ -0.68
HDAC6-230ENST00000488543 AMELYQ99218 206 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 MNTQ99583 582 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 ING1Q9UK53 422 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-230ENST00000488543 FLVCR2Q9UPI3 526 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 MSRB2Q9Y3D2 182 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 KCNMB2Q9Y691 235 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 CHD8Q9HCK8 2581 aa10.82□□□□□ -0.68
HDAC6-230ENST00000488543 IGKV1D-43A0A0B4J1Z2 117 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 UPK3AO75631 287 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 PMS2P2O95744 297 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 SRD5A2P31213 254 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 CASRP41180 1078 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 BIDP55957 195 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC6-230ENST00000488543 TMEM255AQ5JRV8 349 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 CEP78Q5JTW2 689 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 GALNTL5Q7Z4T8 443 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 LGALS14Q8TCE9 139 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 YIPF5Q969M3 257 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 ABI3Q9P2A4 366 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 KCNG2Q9UJ96 466 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 MGAT4AQ9UM21 535 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 COA3Q9Y2R0 106 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-230ENST00000488543 DSPP15924 2871 aaKnown RBP10.81□□□□□ -0.68
HDAC6-230ENST00000488543 PIEZO2Q9H5I5 2752 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 ACOD1A6NK06 481 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 AQP7P3A6NL99 342 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 TOXO94900 526 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 EDNRAP25101 427 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 NANOS3P60323 173 aaKnown RBP10.81□□□□□ -0.68
HDAC6-230ENST00000488543 SLC35A1P78382 337 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 SFRP4Q6FHJ7 346 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-230ENST00000488543 FAAP20Q6NZ36 180 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 UEVLDQ8IX04 471 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 OTOSQ8NHW6 89 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 ACOT12Q8WYK0 555 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 EMC6Q9BV81 110 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 MRPL13Q9BYD1 178 aaKnown RBP10.81□□□□□ -0.68
HDAC6-230ENST00000488543 NIPAL2Q9H841 368 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 ZFP64Q9NPA5 681 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 LAMP5Q9UJQ1 280 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 RABL2BQ9UNT1 228 aa10.81□□□□□ -0.68
HDAC6-230ENST00000488543 OR5H15A6NDH6 313 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 H0YC42 278 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 SULT2B1O00204 365 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 ZNF593O00488 134 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-230ENST00000488543 TRAPPC6AO75865 159 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 MPZL1O95297 269 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 SCGB1D2O95969 90 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 TCRBP04435 133 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 CFL1P23528 166 aaKnown RBP10.8□□□□□ -0.68
HDAC6-230ENST00000488543 CRABP1P29762 137 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 CENPAP49450 140 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 BLVRAP53004 296 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 ARG2P78540 354 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 H3F3AP84243 136 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 MEP1BQ16820 701 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 TOMM5Q8N4H5 51 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 OR2M7Q8NG81 312 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 OXGR1Q96P68 337 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 DCBLD2Q96PD2 775 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDAC6-230ENST00000488543 GHITMQ9H3K2 345 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 TRBV2A0A0J9YWF9 115 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 LOC102725191A0A1B0GVB3 256 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 SP1P08047 785 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 CELA3AP09093 270 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 EGR3Q06889 387 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 MFAP5Q13361 173 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 ST3GAL2Q16842 350 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 LIPNQ5VXI9 398 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 KCTD20Q7Z5Y7 419 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 LIX1LQ8IVB5 337 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 MS4A15Q8N5U1 240 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 ZNF433Q8N7K0 673 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-230ENST00000488543 MDS2Q8NDY4 140 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 ZNF431Q8TF32 576 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-230ENST00000488543 MAP6Q96JE9 813 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 CACNG6Q9BXT2 260 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 TMEM14AQ9Y6G1 99 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 BSNQ9UPA5 3926 aa10.8□□□□□ -0.68
HDAC6-230ENST00000488543 A0A0J9YW62 118 aa10.79□□□□□ -0.68
HDAC6-230ENST00000488543 GMDSO60547 372 aa10.79□□□□□ -0.68
HDAC6-230ENST00000488543 WNT11O96014 354 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms