RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PDGFAP04085 211 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 OCM2P0CE71 109 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 CD40LGP29965 261 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 OR10A3P58181 314 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF45Q02386 682 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 RNPS1Q15287 305 aaKnown RBP8.32□□□□□ -1.08
SF3B1-211ENST00000487698 SFXN4Q6P4A7 337 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 Q6ZS92 163 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 ADGRE4PQ86SQ3 457 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 TUSC5Q8IXB3 177 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 RDH10Q8IZV5 341 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 GPR137CQ8N3F9 429 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 GPR148Q8TDV2 347 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 PPP1R14AQ96A00 147 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 TAAR6Q96RI8 345 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 LINC00470Q9BZP3 86 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 ZCCHC4Q9H5U6 513 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 NIPAL2Q9H841 368 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 GPR35Q9HC97 309 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 B3GAT2Q9NPZ5 323 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 CENPMQ9NSP4 180 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 TMEM38BQ9NVV0 291 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 B3GNT3Q9Y2A9 372 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 NOSIPQ9Y314 301 aaKnown RBP8.32□□□□□ -1.08
SF3B1-211ENST00000487698 CMAHPQ9Y471 501 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF175Q9Y473 711 aa8.32□□□□□ -1.08
SF3B1-211ENST00000487698 TMEM269A0A1B0GVZ9 245 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 LOC110117498-PIK3R3F6TDL0 507 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 AQP7O14520 342 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 RGS5O15539 181 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 RAF1P04049 648 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 ISG15P05161 165 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 SRMP19623 302 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 RAB3BP20337 219 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 NPR2P20594 1047 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 EIF2S3P41091 472 aaKnown RBP8.31□□□□□ -1.08
SF3B1-211ENST00000487698 GUCA1AP43080 201 aaPredicted RBP8.31□□□□□ -1.08
SF3B1-211ENST00000487698 PPP5CP53041 499 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 PSMA6P60900 246 aaKnown RBP8.31□□□□□ -1.08
SF3B1-211ENST00000487698 STK11Q15831 433 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 DDI2Q5TDH0 399 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 SYT9Q86SS6 491 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.31□□□□□ -1.08
SF3B1-211ENST00000487698 PARP16Q8N5Y8 322 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 THRSPQ92748 146 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
SF3B1-211ENST00000487698 ORAI1Q96D31 301 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 GFI1Q99684 422 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 SLCO5A1Q9H2Y9 848 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 ABCB9Q9NP78 766 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 PARPBPQ9NWS1 579 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 OR52A1Q9UKL2 312 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 V9GYH0 126 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 DOCK7Q96N67 2140 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 IGF2RP11717 2491 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 SPENQ96T58 3664 aaKnown RBP8.31□□□□□ -1.08
SF3B1-211ENST00000487698 DMXL2Q8TDJ6 3036 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 RTTNQ86VV8 2226 aa8.31□□□□□ -1.08
SF3B1-211ENST00000487698 ANKRD61A6NGH8 418 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 MRPL33O75394 65 aaKnown RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 WISP2O76076 250 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CST2P09228 141 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CTSSP25774 331 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ODF4Q2M2E3 257 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CEACAM16Q2WEN9 425 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SLC25A35Q3KQZ1 300 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SPANXN2Q5MJ10 180 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 BCL2L15Q5TBC7 163 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 TSPO2Q5TGU0 170 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 GJC3Q8NFK1 279 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ACOT12Q8WYK0 555 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 TMEM106AQ96A25 262 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 FBXO17Q96EF6 278 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 PRRG4Q9BZD6 226 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 MOB1AQ9H8S9 216 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 GP6Q9HCN6 339 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 NUFIP1Q9UHK0 495 aaKnown RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 GTF2A1LQ9UNN4 478 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 CAMK2AQ9UQM7 478 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 LOC107986453A0A1B0GWG9 222 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 OR6C65A6NJZ3 312 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SLC22A20A6NK97 555 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 RPL36A-HNRNPH2H7BZ11 118 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 K7EM74 188 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 TGM6O95932 706 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 TTRP02766 147 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 YES1P07947 543 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 UBCP0CG48 685 aaKnown RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 EPXP11678 715 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 FCGR2AP12318 317 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 ACHEP22303 614 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 OTX1P32242 354 aaPredicted RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 SOX2P48431 317 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 GRB2P62993 217 aaKnown RBP8.3□□□□□ -1.08
SF3B1-211ENST00000487698 PPP3R1P63098 170 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 IFITM3Q01628 133 aa8.3□□□□□ -1.08
SF3B1-211ENST00000487698 GTF3C1Q12789 2109 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms