RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 KRT16P08779 473 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 PSG2P11465 335 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 U2AF2P26368 475 aaKnown RBP eCLIP3.8□□□□□ -1.8
CUL3-211ENST00000487558 CD82P27701 267 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 RFC3P40938 356 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 BCAP31P51572 246 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 ZNF138P52744 262 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 H3F3CQ6NXT2 135 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 ARL9Q6T311 187 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 VTCN1Q7Z7D3 282 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 PRSS58Q8IYP2 241 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 MYOCDQ8IZQ8 938 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 CBR4Q8N4T8 237 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 ZFP41Q8N8Y5 198 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 CHST4Q8NCG5 386 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 OR52E2Q8NGJ4 325 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 OR6Q1Q8NGQ2 317 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 ZFP90Q8TF47 636 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 CYP3A43Q9HB55 503 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 ZNF282Q9UDV7 671 aaPredicted RBP3.8□□□□□ -1.8
CUL3-211ENST00000487558 PRG3Q9Y2Y8 225 aaPredicted RBP3.8□□□□□ -1.8
CUL3-211ENST00000487558 RHBDD3Q9Y3P4 386 aa3.8□□□□□ -1.8
CUL3-211ENST00000487558 NOTCH2Q04721 2471 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 IGHV3-66A0A0C4DH42 116 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 INS-IGF2F8WCM5 200 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 XRCC2O43543 280 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 HSBP1O75506 76 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 HLA-DPB1P04440 258 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 PRPS2P11908 318 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 ATF6P18850 670 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 SRMP19623 302 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 AZU1P20160 251 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 GPR1P46091 355 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 CSNK1A1P48729 337 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 MNAT1P51948 309 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 RPS15AP62244 130 aaKnown RBP3.79□□□□□ -1.8
CUL3-211ENST00000487558 ARG2P78540 354 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 ZNF33AQ06730 810 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 ERCC8Q13216 396 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 C12orf54Q6X4T0 127 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 ABHD12BQ7Z5M8 362 aaPredicted RBP3.79□□□□□ -1.8
CUL3-211ENST00000487558 CMTM8Q8IZV2 173 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 ZNF433Q8N7K0 673 aaPredicted RBP3.79□□□□□ -1.8
CUL3-211ENST00000487558 Q8N976 141 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 LRRC75AQ8NAA5 344 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 PROKR2Q8NFJ6 384 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 OR5T3Q8NGG3 340 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 NAT6Q93015 286 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 NTAN1Q96AB6 310 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 CERS2Q96G23 380 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 CYYR1Q96J86 154 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 CEP170P1Q96L14 293 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 CALN1Q9BXU9 219 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 TDRD3Q9H7E2 651 aaKnown RBP3.79□□□□□ -1.8
CUL3-211ENST00000487558 MYOZ2Q9NPC6 264 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 DYRK4Q9NR20 520 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 OR12D3Q9UGF7 316 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 DDX19BQ9UMR2 479 aa3.79□□□□□ -1.8
CUL3-211ENST00000487558 YARS2Q9Y2Z4 477 aaKnown RBP3.79□□□□□ -1.8
CUL3-211ENST00000487558 CAMTA1Q9Y6Y1 1673 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 ARPC4-TTLL3A0A0A6YYG9 625 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 IGLV1-36A0A0B4J1U3 117 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 TMX2-CTNND1H3BSU7 103 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 ZNF701M0R085 212 aaPredicted RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 RDH16O75452 317 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 SLC25A14O95258 325 aaPredicted RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 FARS2O95363 451 aaKnown RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 OTCP00480 354 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 HPRT1P00492 218 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 EIF4EP06730 217 aaKnown RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 RAB3AP20336 220 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 TUBG1P23258 451 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 LONP1P36776 959 aaKnown RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 NBL1P41271 181 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 UBE2NP61088 152 aaKnown RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 ART3Q13508 389 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 CAPRIN1Q14444 709 aaKnown RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 CHRFAM7AQ494W8 412 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 METTL21CQ5VZV1 264 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 DNAJC24Q6P3W2 148 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 LINC00523Q86TU6 105 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 FAM71AQ8IYT1 594 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 NPWQ8N729 165 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 SNX31Q8N9S9 440 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 KIAA1143Q96AT1 154 aaPredicted RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 ZNF799Q96GE5 643 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 BMFQ96LC9 184 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 SLC25A39Q9BZJ4 359 aaPredicted RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 SLC40A1Q9NP59 571 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 TUBG2Q9NRH3 451 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 RBAKQ9NYW8 714 aaPredicted RBP3.78□□□□□ -1.8
CUL3-211ENST00000487558 CTSFQ9UBX1 484 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 WSB1Q9Y6I7 421 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 CDC42BPBQ9Y5S2 1711 aa3.78□□□□□ -1.8
CUL3-211ENST00000487558 MN1Q10571 1320 aaPredicted RBP3.77□□□□□ -1.81
CUL3-211ENST00000487558 MROH5Q6ZUA9 1318 aa3.77□□□□□ -1.81
CUL3-211ENST00000487558 OR6C74A6NCV1 312 aa3.77□□□□□ -1.81
CUL3-211ENST00000487558 NCBP2LA6PVI3 153 aaKnown RBP3.77□□□□□ -1.81
CUL3-211ENST00000487558 C11orf94C9JXX5 98 aa3.77□□□□□ -1.81
CUL3-211ENST00000487558 K7EMT4 169 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms