RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 REEP1Q9H902 201 aa6.14□□□□□ -1.43
UBE4B-209ENST00000487244 BARX1Q9HBU1 254 aaPredicted RBP6.14□□□□□ -1.43
UBE4B-209ENST00000487244 RPRD1BQ9NQG5 326 aaKnown RBP6.14□□□□□ -1.43
UBE4B-209ENST00000487244 ARMC1Q9NVT9 282 aa6.14□□□□□ -1.43
UBE4B-209ENST00000487244 FBXL3Q9UKT7 428 aa6.14□□□□□ -1.43
UBE4B-209ENST00000487244 CMAHPQ9Y471 501 aa6.14□□□□□ -1.43
UBE4B-209ENST00000487244 PMF1-BGLAPU3KQ54 211 aa6.14□□□□□ -1.43
UBE4B-209ENST00000487244 TANC2Q9HCD6 1990 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 C12orf71A8MTZ7 269 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 KIAA1324LA8MWY0 1029 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 LYNX1G3V0Z9 82 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 RER1O15258 196 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 AHCYL1O43865 530 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 DOK2O60496 412 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 FKBP6O75344 327 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 KHDRBS3O75525 346 aaKnown RBP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 NCR1O76036 304 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CST1P01037 141 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 NGFP01138 241 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 TFP02787 698 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 LCKP06239 509 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 HEXAP06865 529 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 LYNX1P0DP58 116 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 NAT2P11245 290 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 PYCR1P32322 319 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 APLNRP35414 380 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 IFNGR2P38484 337 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 MPV17P39210 176 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CENPAP49450 140 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 UCP2P55851 309 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 HNRNPA0Q13151 305 aaKnown RBP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CARTPTQ16568 116 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CCDC92Q53HC0 331 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 ZNF362Q5T0B9 420 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 RGS7BPQ6MZT1 257 aaPredicted RBP6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CORO6Q6QEF8 472 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CLEC2AQ6UVW9 174 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 CFAP77Q6ZQR2 320 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 RASSF6Q6ZTQ3 369 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 JAZF1Q86VZ6 243 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 IQCF1Q8N6M8 205 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 NPEPL1Q8NDH3 523 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 SLC26A10Q8NG04 563 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 OR10G2Q8NGC3 310 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 OR52E2Q8NGJ4 325 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 OR9Q1Q8NGQ5 310 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 C10orf105Q8TEF2 133 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 ZNRF4Q8WWF5 429 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 FAM168AQ92567 244 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 FEVQ99581 238 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 RHNO1Q9BSD3 238 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 DGCR6LQ9BY27 220 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 KCNN2Q9H2S1 579 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 C1orf198Q9H425 327 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 POFUT1Q9H488 388 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 DYNLRB1Q9NP97 96 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 TBC1D23Q9NUY8 699 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 IL20Q9NYY1 176 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 REV1Q9UBZ9 1251 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 DUSP13Q9UII6 198 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 B9D1Q9UPM9 204 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 SPEF1Q9Y4P9 236 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 TIMM10BQ9Y5J6 103 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 LHFPL6Q9Y693 200 aa6.13□□□□□ -1.43
UBE4B-209ENST00000487244 IGLV3-9A0A075B6K5 115 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 A0A1W2PPW3 197 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 OR6C6A6NF89 314 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 M0R233 179 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 SGCEO43556 437 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 SYNGR3O43761 229 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 TIPRLO75663 272 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 STAMBPO95630 424 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 RENP00797 406 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 PTHP01270 115 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 GYPBP06028 91 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 DBHP09172 617 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 CLUP10909 449 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 ZNF250P15622 560 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 PRKACGP22612 351 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 PCSK6P29122 969 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 RBMXP38159 391 aaKnown RBP6.12□□□□□ -1.43
UBE4B-209ENST00000487244 RPS27P42677 84 aaKnown RBP6.12□□□□□ -1.43
UBE4B-209ENST00000487244 GUCA1AP43080 201 aaPredicted RBP6.12□□□□□ -1.43
UBE4B-209ENST00000487244 HTR5AP47898 357 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 GDI2P50395 445 aaKnown RBP6.12□□□□□ -1.43
UBE4B-209ENST00000487244 KLF3P57682 345 aaPredicted RBP6.12□□□□□ -1.43
UBE4B-209ENST00000487244 PCBD1P61457 104 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 RPS23P62266 143 aaKnown RBP6.12□□□□□ -1.43
UBE4B-209ENST00000487244 CBX1P83916 185 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 AQP6Q13520 282 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 CCNIQ14094 377 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 CRMP1Q14194 572 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 KCNMB1Q16558 191 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 SLC36A3Q495N2 470 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 ZBTB46Q86UZ6 589 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 LINC00346Q8IVM7 164 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 LNX2Q8N448 690 aa6.12□□□□□ -1.43
UBE4B-209ENST00000487244 LINC00471Q8N535 108 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms