RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SARAFQ96BY9 339 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 MAP6Q96JE9 813 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 OR14A2Q96R54 314 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 DCLRE1CQ96SD1 692 aaKnown RBP6.23□□□□□ -1.41
SF3A3-206ENST00000487062 BARHL1Q9BZE3 327 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 LINC00470Q9BZP3 86 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 SLCO5A1Q9H2Y9 848 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 MOB1AQ9H8S9 216 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 GP6Q9HCN6 339 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 ETAA1Q9NY74 926 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 PLEKHB1Q9UF11 243 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-206ENST00000487062 GDF2Q9UK05 429 aaPredicted RBP6.23□□□□□ -1.41
SF3A3-206ENST00000487062 ADAM30Q9UKF2 790 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 CMAHPQ9Y471 501 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF175Q9Y473 711 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 UGT2A1Q9Y4X1 527 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 CSAG2Q9Y5P2 127 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 LIPGQ9Y5X9 500 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 LHFPL6Q9Y693 200 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 ALPK2Q86TB3 2170 aa6.23□□□□□ -1.41
SF3A3-206ENST00000487062 PHF3Q92576 2039 aaKnown RBP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 TRBV5-5A0A0J9YX44 114 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 A0A1B0GVC2 190 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 TMEM269A0A1B0GVZ9 245 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 FAM221AA4D161 298 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ANKRD61A6NGH8 418 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 AQP7O14520 342 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 CTDSP2O14595 271 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 FARS2O95363 451 aaKnown RBP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 APOC1P02654 83 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 CD2P06729 351 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 YES1P07947 543 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 CST2P09228 141 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 UBCP0CG48 685 aaKnown RBP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 BMP4P12644 408 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 SRMP19623 302 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ACHEP22303 614 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 EIF2S3P41091 472 aaKnown RBP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ETV6P41212 452 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 KIR3DL2P43630 455 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 PSMD7P51665 324 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 PPP5CP53041 499 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 PCBD1P61457 104 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 RPS11P62280 158 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 PMP22Q01453 160 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 SF3B4Q15427 424 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 RNFT1Q5M7Z0 435 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 PHYHD1Q5SRE7 291 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 BCL2L15Q5TBC7 163 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 SAMD5Q5TGI4 173 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 FAM27BQ5VT28 67 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 RPUSD3Q6P087 351 aaKnown RBP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 CORO6Q6QEF8 472 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 P4HA3Q7Z4N8 544 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ABHD12BQ7Z5M8 362 aaPredicted RBP6.22□□□□□ -1.41
SF3A3-206ENST00000487062 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 PRSS35Q8N3Z0 413 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 MFSD4AQ8N468 514 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 OR13C5Q8NGS8 318 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 FNDC9Q8TBE3 224 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ABHD3Q8WU67 409 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 HSD17B8Q92506 261 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 WDFY2Q96P53 400 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 DERL3Q96Q80 235 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 SLC30A2Q9BRI3 323 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 WACQ9BTA9 647 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ZNF416Q9BWM5 594 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 BCO1Q9HAY6 547 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 CRLF2Q9HC73 371 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 GPR35Q9HC97 309 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 TCF7L1Q9HCS4 588 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 NOX4Q9NPH5 578 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 GLRX2Q9NS18 164 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 TMEM38BQ9NVV0 291 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 SPRR3Q9UBC9 169 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 ASH2LQ9UBL3 628 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 UPB1Q9UBR1 384 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 DKK4Q9UBT3 224 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 OR52A1Q9UKL2 312 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 HHLA2Q9UM44 414 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 DHDHQ9UQ10 334 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 B3GNT3Q9Y2A9 372 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 EMC9Q9Y3B6 208 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 CNTRLQ7Z7A1 2325 aa6.22□□□□□ -1.41
SF3A3-206ENST00000487062 GVINP1Q7Z2Y8 2422 aa6.21□□□□□ -1.41
SF3A3-206ENST00000487062 ARHGAP21Q5T5U3 1957 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 A0A1W2PPK0 400 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SHISA3A0PJX4 238 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SMIM30A4D0T7 59 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ACOD1A6NK06 481 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SLC22A20A6NK97 555 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 NOTOA8MTQ0 251 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 ZNF587BE7ETH6 402 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 J3QRK9 145 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 DVL2O14641 736 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SLC19A2O60779 497 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 SRSF10O75494 262 aaKnown RBP6.21□□□□□ -1.42
SF3A3-206ENST00000487062 NCR1O76036 304 aa6.21□□□□□ -1.42
SF3A3-206ENST00000487062 PNPP00491 289 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms