RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 HEBP2Q9Y5Z4 205 aa3.22□□□□□ -1.89
PTCD3-216ENST00000487043 SLCO1B1Q9Y6L6 691 aa3.22□□□□□ -1.89
PTCD3-216ENST00000487043 ANKRD12Q6UB98 2062 aa3.22□□□□□ -1.89
PTCD3-216ENST00000487043 NCOR1O75376 2440 aa3.22□□□□□ -1.89
PTCD3-216ENST00000487043 ABCA7Q8IZY2 2146 aa3.22□□□□□ -1.89
PTCD3-216ENST00000487043 COL6A3P12111 3177 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 LRP4O75096 1905 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 IGHV3-16A0A0C4DH30 117 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 A0A1W2PPV9 198 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR6C65A6NJZ3 312 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 CCT8L1PA6NM43 557 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR52A4PA6NMU1 304 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 H0YIV9 168 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 BTN3A3O00478 584 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 B4GALT2O60909 372 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 F10P00742 488 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 KRT6AP02538 564 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 CAPN1P07384 714 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SERPINA6P08185 405 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 HBQ1P09105 142 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SNRPCP09234 159 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 C1GALT1C1LP0DN25 315 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 BCKDHAP12694 445 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TBXA2RP21731 343 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 ATP5A1P25705 553 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 LAP3P28838 519 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 CCNG1P51959 295 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 C21orf59P57076 290 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TBPL1P62380 186 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 IRF8Q02556 426 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 PRDX1Q06830 199 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 FGL1Q08830 312 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 IFT88Q13099 833 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SRSF5Q13243 272 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 IL18R1Q13478 541 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 C1orf61Q13536 156 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 CYLC2Q14093 348 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 DOC2AQ14183 400 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 C17orf58Q2M2W7 97 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 CLEC6AQ6EIG7 209 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR8G2PQ6IF36 304 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 ZNF613Q6PF04 617 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 RNF165Q6ZSG1 346 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 GPRIN3Q6ZVF9 776 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TRPM8Q7Z2W7 1104 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 C17orf82Q86X59 251 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 GKN2Q86XP6 184 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 LINC01561Q8N1V8 128 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SNX31Q8N9S9 440 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 LINC01555Q8NAE3 123 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR2A1Q8NGT9 310 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR2L8Q8NGY9 312 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 FLVCR1-AS1Q8TAF5 88 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 AGR3Q8TD06 166 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TWIST2Q8WVJ9 160 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 PIGCQ92535 297 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TUBGCP3Q96CW5 907 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 CXorf40BQ96DE9 158 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 MED8Q96G25 268 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SLC41A3Q96GZ6 507 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TGM7Q96PF1 710 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR4K3Q96R72 315 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 OR52B2Q96RD2 323 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 KCNA7Q96RP8 456 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SLC6A7Q99884 636 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TMEM43Q9BTV4 400 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 EFCAB11Q9BUY7 163 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 PCBD2Q9H0N5 130 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 NXF5Q9H1B4 397 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 EHD1Q9H4M9 534 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 WDR55Q9H6Y2 383 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 KIR3DX1Q9H7L2 352 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 HEXA-AS1Q9H8Q6 139 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 SAR1AQ9NR31 198 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 BATF3Q9NR55 127 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 PRODH2Q9UF12 536 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 APOBEC3BQ9UH17 382 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 RNF11Q9Y3C5 154 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 FIS1Q9Y3D6 152 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 TIMM22Q9Y584 194 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 ZFC3H1O60293 1989 aaKnown RBP3.21□□□□□ -1.9
PTCD3-216ENST00000487043 THADAQ6YHU6 1953 aa3.21□□□□□ -1.9
PTCD3-216ENST00000487043 PCM1Q15154 2024 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 KCNE1BA0A087WTH5 132 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 GOLGA8QA0A0J9YX86 632 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 GOLGA8OA6NCC3 632 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 EPM2AB3EWF7 344 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 E7EQ34 232 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 GOLGA8NF8WBI6 632 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 H0YHG0 523 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 H7C423 109 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 MANBAO00462 879 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 FCN1O00602 326 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 UBDO15205 165 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 AQP9O43315 295 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 LCMT2O60294 686 aaKnown RBP3.2□□□□□ -1.9
PTCD3-216ENST00000487043 DFNA5O60443 496 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 RAMP1O60894 148 aa3.2□□□□□ -1.9
PTCD3-216ENST00000487043 TRIM3O75382 744 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms