RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 OR2T7P0C7T2 308 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 PCBD1P61457 104 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 SLC35A2P78381 396 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF85Q03923 595 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ST3GAL4Q11206 333 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 AQP6Q13520 282 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 SLC36A2Q495M3 483 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 PABPC1L2AQ5JQF8 200 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ALKBH2Q6NS38 261 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF774Q6NX45 483 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 MEX3BQ6ZN04 569 aaKnown RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 AHSA2Q719I0 299 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 SPATC1Q76KD6 591 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 SSX6Q7RTT6 188 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 P2RY8Q86VZ1 359 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 CCDC36Q8IYA8 594 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 OR10S1Q8NGN2 331 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 OR2AJ1Q8NGZ0 328 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 OR2T27Q8NH04 317 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ST7LQ8TDW4 575 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 THEM6Q8WUY1 208 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 HSD17B8Q92506 261 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 C14orf79Q96F83 325 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 LRRC46Q96FV0 321 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 TMEM80Q96HE8 168 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 SPOCK3Q9BQ16 436 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF649Q9BS31 505 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 COPS4Q9BT78 406 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 TTTY10Q9BZA0 68 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 OR2H1Q9GZK4 316 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 CCNB1IP1Q9NPC3 277 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 PNRC2Q9NPJ4 139 aaKnown RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 CNOT2Q9NZN8 540 aaKnown RBP11.12□□□□□ -0.63
HDAC6-229ENST00000486665 LAMP5Q9UJQ1 280 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 AMDHD2Q9Y303 409 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 TPRKBQ9Y3C4 175 aa11.12□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 UBL3O95164 117 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 FADS2O95864 444 aaKnown RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 IGHA1P01876 353 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 CDK1P06493 297 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 CELA3BP08861 270 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 PIPP12273 146 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 CBR1P16152 277 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 C21orf33P30042 268 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 ARR3P36575 388 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 RAB39AQ14964 217 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 PPA1Q15181 289 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 GSG1Q2KHT4 349 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 TMEM53Q6P2H8 277 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 SEZ6L2Q6UXD5 910 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 SPNS3Q6ZMD2 512 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 VASH1Q7L8A9 365 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 LHFPL3Q86UP9 236 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF584Q8IVC4 421 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 ACBD7Q8N6N7 88 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 ZNF454Q8N9F8 522 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 GJC3Q8NFK1 279 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 SLAMF6Q96DU3 332 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 ZC3HAV1LQ96H79 300 aaKnown RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 USB1Q9BQ65 265 aaKnown RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 WACQ9BTA9 647 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 YTHDF1Q9BYJ9 559 aaKnown RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 C1orf198Q9H425 327 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 OBP2BQ9NPH6 170 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 NPAP1Q9NZP6 1156 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 CLEC2DQ9UHP7 191 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 PCDHGB1Q9Y5G3 927 aa11.11□□□□□ -0.63
HDAC6-229ENST00000486665 HRNRQ86YZ3 2850 aaPredicted RBP11.11□□□□□ -0.63
HDAC6-229ENST00000486665 DAPL1A0PJW8 107 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 IRGMA1A4Y4 181 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 PSMD9O00233 223 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 SGCEO43556 437 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 SYNGR3O43761 229 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 RAB36O95755 333 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 LYNP07948 512 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 HTR1AP08908 422 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 LIMS3P0CW19 117 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 LIMS4P0CW20 117 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 PPP3CBP16298 524 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 IGFBP2P18065 325 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 DCKP27707 260 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 HOXC12P31275 282 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 ETV1P50549 477 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 CHN2P52757 468 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 CDH15P55291 814 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 SORDQ00796 357 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 SCRN3Q0VDG4 424 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 ELFN2Q5R3F8 820 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 MYPOPQ86VE0 399 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-229ENST00000486665 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 STX19Q8N4C7 294 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 RNF133Q8WVZ7 376 aa11.1□□□□□ -0.63
HDAC6-229ENST00000486665 IPCEF1Q8WWN9 437 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-229ENST00000486665 NANOS1Q8WY41 292 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms