RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 NKPD1Q17RQ9 610 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 RSPO1Q2MKA7 263 aaPredicted RBP12.79□□□□□ -0.36
YIF1A-208ENST00000485820 SPATA46Q5T0L3 261 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 TMEM179BQ7Z7N9 219 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 LNX2Q8N448 690 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 OR1F12Q8NHA8 337 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 ABHD4Q8TB40 342 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 SLC7A6Q92536 515 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 GTF3AQ92664 365 aaKnown RBP12.79□□□□□ -0.36
YIF1A-208ENST00000485820 CADM1Q9BY67 442 aaKnown RBP12.79□□□□□ -0.36
YIF1A-208ENST00000485820 RACGAP1Q9H0H5 632 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 FN3KQ9H479 309 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 ELOVL3Q9HB03 270 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 YAE1D1Q9NRH1 226 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 NKIRAS2Q9NYR9 191 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 PLEK2Q9NYT0 353 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 POMPQ9Y244 141 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 LHFPL6Q9Y693 200 aa12.79□□□□□ -0.36
YIF1A-208ENST00000485820 TCRBV3S1A0A5B6 114 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 LILRA1O75019 489 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 CRLF1O75462 422 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 NCR1O76036 304 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 TACSTD2P09758 323 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 ZNF23P17027 643 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GSTM3P21266 225 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GCH1P30793 250 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 ARHGDIAP52565 204 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 MRPS11P82912 194 aaKnown RBP12.78□□□□□ -0.36
YIF1A-208ENST00000485820 TEKQ02763 1124 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GLO1Q04760 184 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 COX10Q12887 443 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GK3PQ14409 553 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 CYB5R2Q6BCY4 276 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 CORO6Q6QEF8 472 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 ARL9Q6T311 187 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 CD300LDQ6UXZ3 194 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 PAPD5Q8NDF8 572 aaKnown RBP12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GJC3Q8NFK1 279 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 OR52L1Q8NGH7 329 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 OR4Q3Q8NH05 313 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 ZNRF4Q8WWF5 429 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 RDH5Q92781 318 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 YIPF5Q969M3 257 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 FEVQ99581 238 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 NIPSNAP1Q9BPW8 284 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 TSSK6Q9BXA6 273 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 POFUT1Q9H488 388 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 STARD10Q9Y365 291 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
YIF1A-208ENST00000485820 LRP5LA4QPB2 252 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 A8MV72 311 aaPredicted RBP12.77□□□□□ -0.37
YIF1A-208ENST00000485820 H3BSA7 217 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 RP2O75695 350 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 ABHD16AO95870 558 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 DBHP09172 617 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 HOXB6P17509 224 aaKnown RBP12.77□□□□□ -0.37
YIF1A-208ENST00000485820 TUBG1P23258 451 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 GGT2P36268 569 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 CCL8P80075 99 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 PSG7Q13046 419 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 FLOT2Q14254 428 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 C6orf52Q5T4I8 152 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 TMEM154Q6P9G4 183 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.37
YIF1A-208ENST00000485820 SPATA24Q86W54 205 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 CYB561A3Q8NBI2 242 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 SLC37A3Q8NCC5 494 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 OR10G2Q8NGC3 310 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 IPCEF1Q8WWN9 437 aaPredicted RBP12.77□□□□□ -0.37
YIF1A-208ENST00000485820 SLCO4A1Q96BD0 722 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 CHODLQ9H9P2 273 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 TUBG2Q9NRH3 451 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 MRPL22Q9NWU5 206 aaKnown RBP12.77□□□□□ -0.37
YIF1A-208ENST00000485820 CYB5R1Q9UHQ9 305 aa12.77□□□□□ -0.37
YIF1A-208ENST00000485820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.373e-7■■□□□ 12.2
YIF1A-208ENST00000485820 ARRDC5A6NEK1 342 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 SOX14O95416 240 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 ACHEP22303 614 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 PYCR1P32322 319 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 GZMKP49863 264 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 ZNF81P51508 661 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 TMEM33P57088 247 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 TRIP10Q15642 601 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 KRTAP27-1Q3LI81 207 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 SLC36A3Q495N2 470 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 SLC18B1Q6NT16 456 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 HIPK1Q86Z02 1210 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 SNX33Q8WV41 574 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 HAVCR1Q96D42 359 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 MSI2Q96DH6 328 aaKnown RBP12.76□□□□□ -0.37
YIF1A-208ENST00000485820 SOX7Q9BT81 388 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 RBM4Q9BWF3 364 aaKnown RBP12.76□□□□□ -0.37
YIF1A-208ENST00000485820 NMNAT2Q9BZQ4 307 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 TBC1D23Q9NUY8 699 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 ARMC1Q9NVT9 282 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 ATPIF1Q9UII2 106 aa12.76□□□□□ -0.37
YIF1A-208ENST00000485820 BAIAP2Q9UQB8 552 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms