RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 TBX21Q9UL17 535 aa3.2□□□□□ -1.9
SRRM1-213ENST00000485441 GPATCH8Q9UKJ3 1502 aaKnown RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 BCKDKO14874 412 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 HOXC4P09017 264 aaPredicted RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 UBCP0CG48 685 aaKnown RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 RALBP11234 206 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 ZNF823P16415 610 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 MAGEA1P43355 309 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 KRTAP12-2P59991 146 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 UBE2MP61081 183 aaKnown RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 RPS15AP62244 130 aaKnown RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 RGNQ15493 299 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 PSMD5Q16401 504 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 THEM4Q5T1C6 240 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 AGBL2Q5U5Z8 902 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 PLET1Q6UQ28 207 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 GPX8Q8TED1 209 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 ZNF414Q96IQ9 312 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 SLC25A2Q9BXI2 301 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 SLC17A9Q9BYT1 436 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 PARP12Q9H0J9 701 aaKnown RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 C8orf33Q9H7E9 229 aaPredicted RBP3.19□□□□□ -1.9
SRRM1-213ENST00000485441 ARID1AO14497 2285 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 FHOD3Q2V2M9 1422 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 ASTN1O14525 1302 aa3.19□□□□□ -1.9
SRRM1-213ENST00000485441 IGLV4-69A0A075B6H9 119 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 A6NDN8 102 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 ZNF99A8MXY4 864 aaPredicted RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 ANKRD63C9JTQ0 380 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 L7N2F9 121 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 RAD51CO43502 376 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 SNAI2O43623 268 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 LSM8O95777 96 aaKnown RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 HBE1P02100 147 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 IFNW1P05000 195 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 PLEKP08567 350 aaPredicted RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 TACSTD2P09758 323 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 GGT1P19440 569 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 CEACAM3P40198 252 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 CCT6AP40227 531 aaKnown RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 SLC11A1P49279 550 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 QPRTQ15274 297 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 PLCXD3Q63HM9 321 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 CEMP1Q6PRD7 247 aaPredicted RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 Q6ZR03 302 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 MBOAT2Q6ZWT7 520 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 SAXO1Q8IYX7 474 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 OR52E2Q8NGJ4 325 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 ISG20Q96AZ6 181 aaKnown RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 JSRP1Q96MG2 331 aaPredicted RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 FOXC2Q99958 501 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 RPRD1BQ9NQG5 326 aaKnown RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 MRPL22Q9NWU5 206 aaKnown RBP3.18□□□□□ -1.9
SRRM1-213ENST00000485441 UVRAGQ9P2Y5 699 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 RAB26Q9ULW5 256 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 RHBDD3Q9Y3P4 386 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 SYNRGQ9UMZ2 1314 aa3.18□□□□□ -1.9
SRRM1-213ENST00000485441 TSPAN11A1L157 253 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 H7C0C1 242 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 ERI3O43414 337 aaKnown RBP3.17□□□□□ -1.9
SRRM1-213ENST00000485441 GABARAPO95166 117 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 BCHEP06276 602 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 EIF4EP06730 217 aaKnown RBP3.17□□□□□ -1.9
SRRM1-213ENST00000485441 CTSLP07711 333 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 CSNK2A2P19784 350 aaPredicted RBP3.17□□□□□ -1.9
SRRM1-213ENST00000485441 PEX19P40855 299 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 GINS1Q14691 196 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 DEFB116Q30KQ4 102 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 HIKESHIQ53FT3 197 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 FAM122BQ7Z309 247 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 ENTHD1Q8IYW4 607 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 LRRC75AQ8NAA5 344 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 TMEM230Q96A57 120 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 BMFQ96LC9 184 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 MICU1Q9BPX6 476 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 BCL7BQ9BQE9 202 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 PLA2G2FQ9BZM2 168 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 PRSS16Q9NQE7 514 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 MYEF2Q9P2K5 600 aaKnown RBP3.17□□□□□ -1.9
SRRM1-213ENST00000485441 ADAMTS13Q76LX8 1427 aa3.17□□□□□ -1.9
SRRM1-213ENST00000485441 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 HLA-DPB1P04440 258 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 CD3GP09693 182 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 TCN2P20062 427 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 RAB4AP20338 218 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 MAGP20916 626 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 WARSP23381 471 aaKnown RBP3.16□□□□□ -1.9
SRRM1-213ENST00000485441 U2AF2P26368 475 aaKnown RBP eCLIP3.16□□□□□ -1.94e-12■■■■■ 32
SRRM1-213ENST00000485441 UCNP55089 124 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 RAB11AP62491 216 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 CDH17Q12864 832 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 DOC2AQ14183 400 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 RAB11BQ15907 218 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 RPEL1Q2QD12 228 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 TRMT5Q32P41 509 aaKnown RBP3.16□□□□□ -1.9
SRRM1-213ENST00000485441 CHRFAM7AQ494W8 412 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 METTL21CQ5VZV1 264 aa3.16□□□□□ -1.9
SRRM1-213ENST00000485441 TMEM205Q6UW68 189 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms