RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CMTM5Q96DZ9 223 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 TSSK2Q96PF2 358 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 NDEL1Q9GZM8 345 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 NUAK2Q9H093 628 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 TBCCD1Q9NVR7 557 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 VSX1Q9NZR4 365 aaPredicted RBP15.7■□□□□ 0.1
CLK1-211ENST00000481641 ASH2LQ9UBL3 628 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 PURGQ9UJV8 347 aaKnown RBP15.7■□□□□ 0.1
CLK1-211ENST00000481641 ZDHHC8Q9ULC8 765 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 AURKCQ9UQB9 309 aa15.7■□□□□ 0.1
CLK1-211ENST00000481641 NBEAL1Q6ZS30 2694 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 RER1O15258 196 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 DBHP09172 617 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 GSTM3P21266 225 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 LCN2P80188 198 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 AQP6Q13520 282 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 MEP1BQ16820 701 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 GPR139Q6DWJ6 353 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 GLB1L2Q8IW92 636 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 SEMA6DQ8NFY4 1073 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 OR2Z1Q8NG97 314 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 GPX7Q96SL4 187 aaPredicted RBP15.69■□□□□ 0.1
CLK1-211ENST00000481641 FUZQ9BT04 418 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 WACQ9BTA9 647 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 SPAG4Q9NPE6 437 aa15.69■□□□□ 0.1
CLK1-211ENST00000481641 A0A0G2JMP0 313 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 A0A0X1KG70 313 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 DCTN6O00399 190 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 PPP1R3DO95685 299 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 SBK2P0C263 348 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 EPHA1P21709 976 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 MSX2P35548 267 aaPredicted RBP15.68■□□□□ 0.1
CLK1-211ENST00000481641 CENPAP49450 140 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 DCAF12L2Q5VW00 463 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 DPY19L2P2Q6ZN68 376 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 OR5AS1Q8N127 324 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 NPEPL1Q8NDH3 523 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 OR4M2Q8NGB6 313 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 OR1F12Q8NHA8 337 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 DHRS1Q96LJ7 313 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 DIRC2Q96SL1 478 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 CGGBP1Q9UFW8 167 aaPredicted RBP15.68■□□□□ 0.1
CLK1-211ENST00000481641 SAMD4AQ9UPU9 718 aaKnown RBP15.68■□□□□ 0.1
CLK1-211ENST00000481641 NPTNQ9Y639 398 aa15.68■□□□□ 0.1
CLK1-211ENST00000481641 OR6C6A6NF89 314 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 KITLGP21583 273 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 ZFP36P26651 326 aaKnown RBP15.67■□□□□ 0.1
CLK1-211ENST00000481641 PRDX6P30041 224 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 LSM6P62312 80 aaKnown RBP15.67■□□□□ 0.1
CLK1-211ENST00000481641 SLC3A1Q07837 685 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 HLXQ14774 488 aaPredicted RBP15.67■□□□□ 0.1
CLK1-211ENST00000481641 KRT72Q14CN4 511 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 ZMAT1Q5H9K5 638 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 ZER1Q7Z7L7 766 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 ITLN1Q8WWA0 313 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 HAVCR1Q96D42 359 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 ERMAPQ96PL5 475 aaPredicted RBP15.67■□□□□ 0.1
CLK1-211ENST00000481641 TMEM106BQ9NUM4 274 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 PTTG3PQ9NZH4 202 aa15.67■□□□□ 0.1
CLK1-211ENST00000481641 A0A0A6YYJ9 748 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 GMNNO75496 209 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 TXNDC12O95881 172 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 IGHV2-70P01814 119 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 SEMG1P04279 462 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 RPS6KA3P51812 740 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 SPIBQ01892 262 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 CORO6Q6QEF8 472 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 SMARCD3Q6STE5 483 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 C1QL2Q7Z5L3 287 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 PEG10Q86TG7 708 aaKnown RBP15.66■□□□□ 0.1
CLK1-211ENST00000481641 ADCK1Q86TW2 530 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 ZNF418Q8TF45 676 aaPredicted RBP15.66■□□□□ 0.1
CLK1-211ENST00000481641 PTP4A1Q93096 173 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 PYURFQ96I23 114 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 C7orf69Q9H7B7 122 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 SRA1Q9HD15 236 aaKnown RBP15.66■□□□□ 0.1
CLK1-211ENST00000481641 OPN4Q9UHM6 478 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 PCDHB10Q9UN67 800 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 POLR1DQ9Y2S0 133 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 LHFPL6Q9Y693 200 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 TENM1Q9UKZ4 2725 aa15.66■□□□□ 0.1
CLK1-211ENST00000481641 SNX3O60493 162 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 TNFSF4P23510 183 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 KCNMB1Q16558 191 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 OR2T2Q6IF00 324 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 LEG1Q6P5S2 330 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 FANK1Q8TC84 345 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 ST7LQ8TDW4 575 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 SAMD8Q96LT4 415 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 NMNAT3Q96T66 252 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 OR52D1Q9H346 318 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 GORASP2Q9H8Y8 452 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 KRCC1Q9NPI7 259 aaPredicted RBP15.65■□□□□ 0.1
CLK1-211ENST00000481641 B9D1Q9UPM9 204 aa15.65■□□□□ 0.1
CLK1-211ENST00000481641 IGLV1-36A0A0B4J1U3 117 aa15.64■□□□□ 0.09
CLK1-211ENST00000481641 J3QLI3 93 aa15.64■□□□□ 0.09
CLK1-211ENST00000481641 GADD45GO95257 159 aa15.64■□□□□ 0.09
CLK1-211ENST00000481641 TUBG1P23258 451 aa15.64■□□□□ 0.09
CLK1-211ENST00000481641 SEC61A1P61619 476 aaKnown RBP15.64■□□□□ 0.09
CLK1-211ENST00000481641 RFX4Q33E94 735 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms