RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 RGS6P49758 472 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 GZMMP51124 257 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 PRKCDQ05655 676 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 MALLQ13021 153 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 AQP6Q13520 282 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 TAF13Q15543 124 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 HIST3H3Q16695 136 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 MBNL2Q5VZF2 373 aaKnown RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SLC27A4Q6P1M0 643 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 TBPL2Q6SJ96 375 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SHISA2Q6UWI4 295 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 NLRC3Q7RTR2 1065 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 C1QL2Q7Z5L3 287 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 CPLX4Q7Z7G2 160 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SYT9Q86SS6 491 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 ADCK1Q86TW2 530 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 C1orf87Q8N0U7 546 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 MUC20Q8N307 709 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 BHLHE23Q8NDY6 225 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 OR52L1Q8NGH7 329 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SPRYD4Q8WW59 207 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 RASD2Q96D21 266 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 RSRC1Q96IZ7 334 aaKnown RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 PLEKHA8Q96JA3 519 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 POM121L2Q96KW2 1035 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 Q96M85 177 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF75AQ96N20 296 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF582Q96NG8 517 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 PITX2Q99697 317 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SLC6A7Q99884 636 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 IFT27Q9BW83 186 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 TMPRSS13Q9BYE2 586 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 MMADHCQ9H3L0 296 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 NMNAT1Q9HAN9 279 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SPAG4Q9NPE6 437 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 POLE4Q9NR33 117 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 PTTG3PQ9NZH4 202 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 ASH2LQ9UBL3 628 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 A4GNTQ9UNA3 340 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 N6AMT1Q9Y5N5 214 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 IER3IP1Q9Y5U9 82 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 SNX13Q9Y5W8 968 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 CACNG2Q9Y698 323 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 ENPP4Q9Y6X5 453 aa6.01□□□□□ -1.45
COL17A1-205ENST00000480127 IGKV1D-43A0A0B4J1Z2 117 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 IGHV3-64DA0A0J9YX35 117 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 PRSS37A4D1T9 235 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 OR6C6A6NF89 314 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 OR10H3O60404 316 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 RP2O75695 350 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 GADD45GO95257 159 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 NGFP01138 241 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 IGHMP01871 453 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 HKR1P10072 659 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 RPS2P15880 293 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 H2AFXP16104 143 aaPredicted RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF823P16415 610 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SELEP16581 610 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 TUBG1P23258 451 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SDHAP31040 664 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SLC6A6P31641 620 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 GSK3BP49841 420 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 PSME3P61289 254 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 BTG1P62324 171 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 UBA52P62987 128 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 FOXL1Q12952 345 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SLC36A3Q495N2 470 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 LEG1Q6P5S2 330 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 PGM2L1Q6PCE3 622 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SLC25A47Q6Q0C1 308 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SMARCD3Q6STE5 483 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 TREML4Q6UXN2 200 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 NHLRC1Q6VVB1 395 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 VASH1Q7L8A9 365 aaPredicted RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 MRPL21Q7Z2W9 205 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 LNX2Q8N448 690 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 RNF148Q8N7C7 305 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 BOLLQ8N9W6 283 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 GJC3Q8NFK1 279 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 OR10AD1Q8NGE0 317 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 OR11L1Q8NGX0 322 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 OR1F12Q8NHA8 337 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 ITLN1Q8WWA0 313 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 LIPHQ8WWY8 451 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 NABP1Q96AH0 204 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 APOBEC3DQ96AK3 386 aaPredicted RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 MARS2Q96GW9 593 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 ERMAPQ96PL5 475 aaPredicted RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 ELAC2Q9BQ52 826 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 WACQ9BTA9 647 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 MS4A7Q9GZW8 240 aaPredicted RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 NTN4Q9HB63 628 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 SRA1Q9HD15 236 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 MED4Q9NPJ6 270 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 TUBG2Q9NRH3 451 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 TMEM106BQ9NUM4 274 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 CMTM6Q9NX76 183 aa6□□□□□ -1.45
COL17A1-205ENST00000480127 PURGQ9UJV8 347 aaKnown RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 COA3Q9Y2R0 106 aaPredicted RBP6□□□□□ -1.45
COL17A1-205ENST00000480127 UGT2A1Q9Y4X1 527 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms