RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 BCL2L1Q07817 233 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 ILKQ13418 452 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 ISXQ2M1V0 245 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 N4BP2L1Q5TBK1 243 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 SPECC1LQ69YQ0 1117 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RWDD4Q6NW29 188 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 H2AFVQ71UI9 128 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 BBS5Q8N3I7 341 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 Q8N7P7 452 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 DEFB124Q8NES8 71 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR8J1Q8NGP2 316 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR56B4Q8NH76 319 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF564Q8TBZ8 553 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 ECHDC3Q96DC8 303 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 SERAC1Q96JX3 654 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 RBM14Q96PK6 669 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 PEBP4Q96S96 227 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLHDC3Q9BQ90 382 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 TM6SF2Q9BZW4 377 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 FAM107BQ9H098 131 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 NEUROG2Q9H2A3 272 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 MCCC2Q9HCC0 563 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 PIGLQ9Y2B2 252 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 FADS3Q9Y5Q0 445 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 SNX10Q9Y5X0 201 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 ANKRD11Q6UB99 2663 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 CEP295Q9C0D2 2601 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 COL6A6A6NMZ7 2263 aa2.88□□□□□ -1.95
CDC42BPA-212ENST00000478573 TNRC6AQ8NDV7 1962 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A087X0T9 212 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 A0A0U1RQS6 177 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 TUBAL3A6NHL2 446 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 TMEM110-MUSTN1A8MSY1 372 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 IDSB3KWA1 339 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PSMD11O00231 422 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 TNFSF11O14788 317 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PSTPIP1O43586 416 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 MFSD11O43934 449 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF189O75820 626 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PROSCO94903 275 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 TSPAN12O95859 305 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 IGHV3-48P01763 117 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 HSPB1P04792 205 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 GP1BAP07359 652 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 IVLP07476 585 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 KRT7P08729 469 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR8U8P0C7N1 319 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 FAM228BP0C875 321 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CCDC166P0CW27 439 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 MIPP30301 263 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CASP14P31944 242 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 MAGEA8P43361 318 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CSNK1EP49674 416 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CDH6P55285 790 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PFN3P60673 137 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 LRRC74AQ0VAA2 488 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 DDX39BQ13838 428 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF235Q14590 738 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ARL6IP1Q15041 203 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PAFAH1B3Q15102 231 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PDK2Q15119 407 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZMYND11Q15326 602 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 HADHQ16836 314 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 BOLA3Q53S33 107 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 KLF17Q5JT82 389 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 C9orf129Q5T035 196 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PDZK1Q5T2W1 519 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 RSBN1Q5VWQ0 802 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ACOT7LQ6ZUV0 252 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 GDPD3Q7L5L3 318 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 NRMQ8IXM6 262 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZBED8Q8IZ13 594 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CNPY4Q8N129 248 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ATPAF2Q8N5M1 289 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 DEFB119Q8N690 84 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 NPWQ8N729 165 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 FAM83FQ8NEG4 500 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR9A1PQ8NGU1 263 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 OR4C6Q8NH72 309 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CXorf40AQ8TE69 158 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 MAIP1Q8WWC4 291 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 N4BP2L2Q92802 583 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 NEIL2Q969S2 332 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 UBE2E3Q969T4 207 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNF641Q96N77 438 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CSPG4P5Q96PW8 444 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLC38A2Q96QD8 506 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 SMIM14Q96QK8 99 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 TBX15Q96SF7 602 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 MYCBPQ99417 103 aaPredicted RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 SLITRK2Q9H156 845 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 DHX35Q9H5Z1 703 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 ZNHIT6Q9NWK9 470 aaKnown RBP2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 IFNKQ9P0W0 207 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PYCARDQ9ULZ3 195 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 CPAMD8Q8IZJ3 1885 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 EPG5Q9HCE0 2579 aa2.87□□□□□ -1.95
CDC42BPA-212ENST00000478573 PKD1L2Q7Z442 2459 aa2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 URB1O60287 2271 aaKnown RBP2.86□□□□□ -1.95
CDC42BPA-212ENST00000478573 BPTFQ12830 3046 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms